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ACD22_57

Alias: ACD22_11832.16020.20

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD22_57_1

Not on your lists

comp(3..446)
DNA (444bp) protein (148aa)
coiled-coil (db=Coil db_id=coil from=99 to=120 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKE00473.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_57_2

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comp(711..1784)
DNA (1074bp) protein (358aa)
seg (db=Seg db_id=seg from=299 to=310)
seg (db=Seg db_id=seg from=46 to=57)
CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE-RELATED (db=HMMPanther db_id=PTHR22982 from=138 to=191 evalue=0.00065 interpro_id=IPR020636 interpro_description=Calcium/calmodulin-dependent protein kinase-like)
gb def: OSJNBa0073E02.9 protein (db=HMMPanther db_id=PTHR22982:SF9 from=138 to=191 evalue=0.00065 interpro_id=IPR020641 interpro_description=Protein kinase, predicted)
ACD22_57_3

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comp(1862..3769)
DNA (1908bp) protein (636aa)
seg (db=Seg db_id=seg from=528 to=542)
Uncharacterized protein {ECO:0000313|EMBL:EKE00475.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_57_4

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comp(3769..4782)
DNA (1014bp) protein (338aa)
3769..4782 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE00476.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_57_5

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comp(5241..6131)
DNA (891bp) protein (297aa)
hypothetical protein (db=KEGG evalue=1.0e-09 bit_score=67.8 identity=32.71 coverage=65.993265993266)
seg (db=Seg db_id=seg from=70 to=83)
DUF1814 (db=HMMPfam db_id=PF08843 from=42 to=261 evalue=4.3e-23 interpro_id=IPR014942 interpro_description=Protein of unknown function DUF1814)
Uncharacterized protein {ECO:0000313|EMBL:EKE00477.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_57_6
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

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comp(6121..6771)
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J9C8_9ARCH (db=UNIREF evalue=3.0e-10 bit_score=68.6 identity=33.1 coverage=61.7511520737327)
hypothetical protein
hypothetical protein Tax=RBG_16_WWE3_37_10_curated
ACD22_57_7

Not on your lists

comp(6850..7764)
DNA (915bp) protein (305aa)
seg (db=Seg db_id=seg from=198 to=210)
Uncharacterized protein {ECO:0000313|EMBL:EKE00479.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_57_8
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

comp(7840..8583)
DNA (744bp) protein (248aa)
DUF1814 (db=HMMPfam db_id=PF08843 from=17 to=182 evalue=4.2e-16 interpro_id=IPR014942 interpro_description=Protein of unknown function DUF1814)
hypothetical protein Tax=RBG_16_WWE3_37_10_curated
hypothetical protein
ACD22_57_9
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

comp(8583..9131)
DNA (549bp) protein (183aa)
seg (db=Seg db_id=seg from=47 to=62)
hypothetical protein Tax=RBG_16_WWE3_37_10_curated
hypothetical protein
ACD22_57_10
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

comp(9170..9601)
DNA (432bp) protein (144aa)
PilT protein domain-containing protein
PIN domain-like (db=superfamily db_id=SSF88723 from=1 to=141 evalue=3.1e-16)
PIN (db=HMMPfam db_id=PF01850 from=10 to=141 evalue=2.9e-07 interpro_id=IPR002716 interpro_description=PilT protein, N-terminal)
PilT protein domain protein alias=ACD22_11832.16020.20G0010,ACD22_11832.16020.20_10,ACD22_C00057G00010 id=23098 tax=ACD22 species=Caldicellulosiruptor bescii genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_group=WWE3 organism_desc=WWE3
ACD22_57_11
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

comp(9582..9845)
DNA (264bp) protein (88aa)
AbrB/MazE/MraZ-like (db=superfamily db_id=SSF89447 from=1 to=44 evalue=5.6e-07)
lp_hng_hel_AbrB: transcriptional regu (db=HMMTigr db_id=TIGR01439 from=4 to=46 evalue=2.5e-06 interpro_id=IPR006339 interpro_description=Transcription regulator AbrB)
AbrB/MazE/MraZ-like Tax=RBG_16_WWE3_37_10_curated
ACD22_57_12

Not on your lists

comp(9901..10758)
DNA (858bp) protein (286aa)
PIN/TRAM protein
PilT protein domain protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W3V9_DESAS (db=UNIREF evalue=4.0e-48 bit_score=195.0 identity=51.78 coverage=66.4335664335664)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
seg (db=Seg db_id=seg from=9 to=30)
ACD22_57_13

Not on your lists

comp(10755..12059)
DNA (1305bp) protein (435aa)
hypothetical protein
hypothetical protein
DNA repair protein radA n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVD6_9BACT (db=UNIREF evalue=3.0e-158 bit_score=561.0 identity=63.34 coverage=98.3908045977011)
sms: DNA repair protein RadA (db=HMMTigr db_id=TIGR00416 from=1 to=433 evalue=1.1e-191 interpro_id=IPR004504 interpro_description=DNA repair protein RadA GO=Molecular Function: damaged DNA binding (GO:0003684), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281))
ACD22_57_14

Not on your lists

comp(12149..14452)
DNA (2304bp) protein (768aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CSY2_9FIRM (db=UNIREF evalue=9.0e-94 bit_score=348.0 identity=34.66 coverage=88.1510416666667)
seg (db=Seg db_id=seg from=546 to=562)
seg (db=Seg db_id=seg from=434 to=450)
ACD22_57_15

Not on your lists


comp(14457..15560)
DNA (1104bp) protein (368aa)
30S ribosomal protein S1
30S ribosomal protein S1 n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVD5_9BACT (db=UNIREF evalue=3.0e-120 bit_score=435.0 identity=70.2 coverage=94.2934782608696)
seg (db=Seg db_id=seg from=1 to=16)
Displaying 15 items

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