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ACD22_84

Alias: ACD22_14584.9436.19

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD22_84_1
unknown

Not on your lists

comp(3..65)
DNA (63bp) protein (21aa)
3..65 - (rbs_motif=TATAAT rbs_spacer=10bp)
ACD22_84_2

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161..457
DNA (297bp) protein (99aa)
hypothetical protein
no description (db=HMMSmart db_id=SM00418 from=6 to=84 evalue=4.5e-20 interpro_id=IPR001845 interpro_description=HTH transcriptional regulator, ArsR GO=Molecular Function: transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=90 evalue=3.5e-18)
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=6 to=79 evalue=1.5e-15 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
ACD22_84_3

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698..1411
DNA (714bp) protein (238aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=130 to=143)
gb def: ComEA protein-related protein (db=HMMPanther db_id=PTHR21180:SF4 from=180 to=237 evalue=1.4e-09)
ACD22_84_4

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1419..2507
DNA (1089bp) protein (363aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=108 to=130)
transmembrane_regions (db=TMHMM db_id=tmhmm from=137 to=154)
ACD22_84_5

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2504..3247
DNA (744bp) protein (248aa)
beta-lactamase domain-containing protein
Metallo-hydrolase/oxidoreductase (db=superfamily db_id=SSF56281 from=31 to=244 evalue=1.2e-29)
Lactamase_B (db=HMMPfam db_id=PF00753 from=37 to=161 evalue=2.9e-08)
no description (db=HMMSmart db_id=SM00849 from=38 to=211 evalue=0.0012 interpro_id=IPR001279 interpro_description=Beta-lactamase-like GO=Molecular Function: hydrolase activity (GO:0016787))
ACD22_84_6

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3266..5191
DNA (1926bp) protein (642aa)
arginyl-tRNA synthetase
arginyl-tRNA synthetase
Arginyl-tRNA synthetase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J6N4_9BACL (db=UNIREF evalue=9.0e-108 bit_score=394.0 identity=33.92 coverage=92.5233644859813)
ARGINYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR11956 from=24 to=641 evalue=2.6e-84 interpro_id=IPR001278 interpro_description=Arginyl-tRNA synthetase, class Ic GO=Molecular Function: arginine-tRNA ligase activity (GO:0004814), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: arginyl-tRNA aminoacylation (GO:0006420))
ACD22_84_7

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5205..6293
DNA (1089bp) protein (363aa)
hypothetical protein
seg (db=Seg db_id=seg from=97 to=124)
seg (db=Seg db_id=seg from=4 to=14)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=39)
ACD22_84_8

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6299..6880
DNA (582bp) protein (194aa)
hypothetical protein
Nucleoside diphosphate kinase, NDK (db=superfamily db_id=SSF54919 from=1 to=182 evalue=4.8e-39 interpro_id=IPR001564 interpro_description=Nucleoside diphosphate kinase, core GO=Molecular Function: nucleoside diphosphate kinase activity (GO:0004550), Molecular Function: ATP binding (GO:0005524), Biological Process: GTP biosynthetic process (GO:0006183), Biological Process: UTP biosynthetic process (GO:0006228), Biological Process: CTP biosynthetic process (GO:0006241))
no description (db=HMMSmart db_id=SM00562 from=2 to=182 evalue=3.5e-35 interpro_id=IPR001564 interpro_description=Nucleoside diphosphate kinase, core GO=Molecular Function: nucleoside diphosphate kinase activity (GO:0004550), Molecular Function: ATP binding (GO:0005524), Biological Process: GTP biosynthetic process (GO:0006183), Biological Process: UTP biosynthetic process (GO:0006228), Biological Process: CTP biosynthetic process (GO:0006241))
no description (db=Gene3D db_id=G3DSA:3.30.70.141 from=3 to=192 evalue=4.2e-31 interpro_id=IPR001564 interpro_description=Nucleoside diphosphate kinase, core GO=Molecular Function: nucleoside diphosphate kinase activity (GO:0004550), Molecular Function: ATP binding (GO:0005524), Biological Process: GTP biosynthetic process (GO:0006183), Biological Process: UTP biosynthetic process (GO:0006228), Biological Process: CTP biosynthetic process (GO:0006241))
ACD22_84_9

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7028..7489
DNA (462bp) protein (154aa)
NUDIX family hydrolase n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HTF4_9FIRM (db=UNIREF evalue=1.0e-11 bit_score=72.4 identity=30.33 coverage=77.2727272727273)
NUDIX hydrolase
NUDIX_BOX (db=PatternScan db_id=PS00893 from=51 to=72 evalue=0.0 interpro_id=IPR020084 interpro_description=NUDIX hydrolase, conserved site GO=Molecular Function: hydrolase activity (GO:0016787))
Nudix (db=superfamily db_id=SSF55811 from=21 to=153 evalue=2.0e-25 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
ACD22_84_10

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7486..8190
DNA (705bp) protein (235aa)
hypothetical protein
DNA alkylation repair enzyme n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GJF2_METPE (db=UNIREF evalue=8.0e-74 bit_score=280.0 identity=55.74 coverage=99.1489361702128)
DNA_alkylation (db=HMMPfam db_id=PF08713 from=8 to=223 evalue=9.6e-62 interpro_id=IPR014825 interpro_description=DNA alkylation repair enzyme)
ARM repeat (db=superfamily db_id=SSF48371 from=11 to=229 evalue=2.1e-49 interpro_id=IPR016024 interpro_description=Armadillo-type fold GO=Molecular Function: binding (GO:0005488))
ACD22_84_11

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9017..9475
DNA (459bp) protein (153aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=40)
Sortase (db=HMMPfam db_id=PF04203 from=89 to=152 evalue=0.00011 interpro_id=IPR005754 interpro_description=Peptidase C60, sortase A/B)
Uncharacterized protein {ECO:0000313|EMBL:EKE00386.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
Displaying 11 items

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