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ACD22_98

Alias: ACD22_37215.18544.18

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD22_98_1

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1..927
DNA (927bp) protein (309aa)
Nucleotidyltransferase/DNA polymerase involved in DNA repair
DNA/RNA polymerases (db=superfamily db_id=SSF56672 from=2 to=139 evalue=1.5e-28)
DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER (db=HMMPanther db_id=PTHR11076 from=2 to=222 evalue=4.2e-19 interpro_id=IPR001126 interpro_description=DNA-repair protein, UmuC-like GO=Molecular Function: damaged DNA binding (GO:0003684), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA repair (GO:0006281))
Lesion bypass DNA polymerase (Y-family), little finger domain (db=superfamily db_id=SSF100879 from=143 to=252 evalue=1.8e-10 interpro_id=IPR017961 interpro_description=DNA polymerase, Y-family, little finger domain GO=Molecular Function: damaged DNA binding (GO:0003684), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA repair (GO:0006281))
ACD22_98_2

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1750..2019
DNA (270bp) protein (90aa)
coiled-coil (db=Coil db_id=coil from=35 to=73 evalue=NA)
seg (db=Seg db_id=seg from=42 to=56)
Uncharacterized protein {ECO:0000313|EMBL:EKD99930.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_98_3

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2106..2846
DNA (741bp) protein (247aa)
26 kDa periplasmic immunogenic protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
seg (db=Seg db_id=seg from=145 to=152)
seg (db=Seg db_id=seg from=15 to=25)
ACD22_98_4

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comp(2903..5353)
DNA (2451bp) protein (817aa)
hypothetical protein
hypothetical protein
Leucyl-tRNA synthetase n=1 Tax=Anoxybacillus flavithermus WK1 RepID=SYL_ANOFW (db=UNIREF evalue=0.0 bit_score=748.0 identity=46.24 coverage=98.0416156670747)
seg (db=Seg db_id=seg from=767 to=778)
ACD22_98_5

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5420..5596
DNA (177bp) protein (59aa)
prpL33; ribosomal protein L33
Ribosomal_L33 (db=HMMPfam db_id=PF00471 from=8 to=53 evalue=1.2e-19 interpro_id=IPR001705 interpro_description=Ribosomal protein L33 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpmG_bact: ribosomal protein L33 (db=HMMTigr db_id=TIGR01023 from=1 to=58 evalue=1.1e-18 interpro_id=IPR001705 interpro_description=Ribosomal protein L33 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Zn-binding ribosomal proteins (db=superfamily db_id=SSF57829 from=4 to=55 evalue=1.5e-15 interpro_id=IPR011332 interpro_description=Ribosomal protein, zinc-binding domain GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD22_98_6

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6774..8084
DNA (1311bp) protein (437aa)
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZZ33_9BACT (db=UNIREF evalue=2.0e-63 bit_score=246.0 identity=34.91 coverage=98.1693363844393)
EPT/RTPC-like (db=superfamily db_id=SSF55205 from=2 to=436 evalue=1.1e-75 interpro_id=IPR013792 interpro_description=RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO=Molecular Function: catalytic activity (GO:0003824))
UDP-N-ACETYLGLUCOSAMINE ENOLPYRUVYL TRANSFERASE (db=HMMPanther db_id=PTHR21090:SF4 from=79 to=436 evalue=6.3e-69 interpro_id=IPR005750 interpro_description=UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO=Molecular Function: transferase activity (GO:0016740), Biological Process: UDP-N-acetylgalactosamine biosynthetic process (GO:0019277))
ACD22_98_7

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8099..9073
DNA (975bp) protein (325aa)
seg (db=Seg db_id=seg from=238 to=267)
seg (db=Seg db_id=seg from=34 to=46)
transmembrane_regions (db=TMHMM db_id=tmhmm from=275 to=297)
transmembrane_regions (db=TMHMM db_id=tmhmm from=232 to=265)
ACD22_98_8

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9642..10172
DNA (531bp) protein (177aa)
seg (db=Seg db_id=seg from=63 to=80)
coiled-coil (db=Coil db_id=coil from=147 to=175 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKD99919.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_98_9

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10220..10975
DNA (756bp) protein (252aa)
protein-disulfide isomerase
Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BUL2_9GAMM (db=UNIREF evalue=8.0e-25 bit_score=117.0 identity=32.42 coverage=68.6507936507936)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=39)
Thioredoxin-like (db=superfamily db_id=SSF52833 from=62 to=245 evalue=4.4e-31 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
ACD22_98_10

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11012..11689
DNA (678bp) protein (226aa)
hypothetical protein
RSMI (db=PatternScan db_id=PS01296 from=83 to=94 evalue=0.0 interpro_id=IPR018063 interpro_description=Uncharacterised protein family UPF0011, conserved site)
Tetrapyrrole methylase (db=superfamily db_id=SSF53790 from=3 to=222 evalue=2.4e-77 interpro_id=IPR000878 interpro_description=Tetrapyrrole methylase GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED (db=HMMPanther db_id=PTHR21091 from=46 to=222 evalue=7.9e-48)
ACD22_98_11

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11709..13751
DNA (2043bp) protein (681aa)
UvrD/Rep helicase
coiled-coil (db=Coil db_id=coil from=6 to=34 evalue=NA)
coiled-coil (db=Coil db_id=coil from=350 to=371 evalue=NA)
seg (db=Seg db_id=seg from=56 to=67)
ACD22_98_12

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13773..15380
DNA (1608bp) protein (536aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=326 to=348)
transmembrane_regions (db=TMHMM db_id=tmhmm from=368 to=390)
seg (db=Seg db_id=seg from=107 to=116)
seg (db=Seg db_id=seg from=369 to=381)
ACD22_98_13

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15381..15917
DNA (537bp) protein (179aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=114 to=136)
transmembrane_regions (db=TMHMM db_id=tmhmm from=80 to=102)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
ACD22_98_14

Not on your lists

comp(15882..16265)
DNA (384bp) protein (128aa)
diacylglycerol kinase
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=51)
seg (db=Seg db_id=seg from=105 to=118)
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=77)
ACD22_98_15

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16312..17361
DNA (1050bp) protein (350aa)
hypothetical protein
hypothetical protein BACCOPRO_01848 n=1 Tax=Bacteroides coprophilus DSM 18228 RepID=UPI000197B032 (db=UNIREF evalue=1.0e-18 bit_score=97.8 identity=27.95 coverage=92.8571428571429)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
RND_mfp: efflux transporter, RND family, MFP (db=HMMTigr db_id=TIGR01730 from=32 to=347 evalue=5.1e-35 interpro_id=IPR006143 interpro_description=Secretion protein HlyD GO=Molecular Function: protein transporter activity (GO:0008565), Biological Process: protein secretion (GO:0009306), Cellular Component: membrane (GO:0016020))
ACD22_98_16

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17363..18034
DNA (672bp) protein (224aa)
Abc transporter related protein
seg (db=Seg db_id=seg from=42 to=49)
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=146 to=160 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF32 from=6 to=223 evalue=1.9e-108)
Displaying 16 items

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