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DolZOral124_scaffold_1382

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1382_1
unknown

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1..120
DNA (120bp) protein (40aa)

This feature has no annotations

DolZOral124_scaffold_1382_2
RIFOXYC1_FULL_RIF_OD1_09_52_10_curated, RIF-OD1-9, Parcubacteria, Bacteria

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105..884
DNA (780bp) protein (260aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20) Tax=RIFOXYC1_FULL_RIF_OD1_09_52_10_curated
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] id=5803667 bin=OD1_GWC2_34_28 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
OD1 Jill Banfield (4/9/15)
DolZOral124_scaffold_1382_3
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists


896..2881
DNA (1986bp) protein (662aa)
phenylalanine--tRNA ligase (EC:6.1.1.20)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036FB867
phenylalanyl-tRNA synthetase, beta subunit Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
DolZOral124_scaffold_1382_4
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

2999..4192
DNA (1194bp) protein (398aa)
hypothetical protein id=8366 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
membrane protein of unknown function
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
DolZOral124_scaffold_1382_5
R_RIF_OD1_11_44_35, RIF-OD1-11, Parcubacteria, Bacteria

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4334..4648
DNA (315bp) protein (105aa)
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_11_44_35_curated
LSU ribosomal protein L21P; K02888 large subunit ribosomal protein L21 id=5803470 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rplU; 50S ribosomal protein L21
DolZOral124_scaffold_1382_6
R_OD1_Campbellbacteria_35_12, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists

4783..6609
DNA (1827bp) protein (609aa)
single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_OD1_Campbellbacteria_35_12_curated
single-stranded-DNA-specific exonuclease recJ (EC:3.1.-.-); K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] id=5803114 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
single-stranded-DNA-specific exonuclease RecJ
DolZOral124_scaffold_1382_7
R_OD1_Kaiserbacteria_48_10, Kaiserbacteria, Parcubacteria, Bacteria

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6694..7122
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GTU3_9BACT
GCN5-related N-acetyltransferase Tax=RIFCSPHIGHO2_01_FULL_OD1_Kaiserbacteria_48_10_curated
DolZOral124_scaffold_1382_8
R_RIF_OD1_11_43_32b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

7460..8941
DNA (1482bp) protein (494aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:1000 RepID=R5A6E5_9CLOT
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_43_32b_curated
ABC transporter ATPase component
DolZOral124_scaffold_1382_9
RIFOXYD1_FULL_Bdellovibrionales_44_7_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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9299..10204
DNA (906bp) protein (302aa)
Tax=RIFOXYD1_FULL_Bdellovibrionales_44_7_curated
DolZOral124_scaffold_1382_10

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10410..12095
DNA (1686bp) protein (562aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginyl-tRNA synthetase n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PTF9_9SPIO id=129499 bin=ACD7 species=Treponema vincentii genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=ACD7 organism_group=OD1-i organism_desc=OD1-i rbh
Arginyl-tRNA synthetase {ECO:0000313|EMBL:EKE22040.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
DolZOral124_scaffold_1382_11
unknown

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12105..12380
DNA (276bp) protein (92aa)

This feature has no annotations

DolZOral124_scaffold_1382_12
unknown

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12480..12740
DNA (261bp) protein (87aa)

This feature has no annotations

DolZOral124_scaffold_1382_13

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12850..14073
DNA (1224bp) protein (408aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein T
Probable tRNA sulfurtransferase n=1 Tax=uncultured bacterium RepID=K2A9H9_9BACT
thiamine biosynthesis/tRNA modification protein ThiI
DolZOral124_scaffold_1382_14
unknown

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14223..14339
DNA (117bp) protein (39aa)

This feature has no annotations

DolZOral124_scaffold_1382_15
unknown

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14336..14464
DNA (129bp) protein (43aa)

This feature has no annotations

DolZOral124_scaffold_1382_16
unknown

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14483..14575
DNA (93bp) protein (31aa)

This feature has no annotations

DolZOral124_scaffold_1382_17
GWC1_OD1_35_31, Campbellbacteria, Parcubacteria, Bacteria

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comp(15028..15717)
DNA (690bp) protein (230aa)
seg id=5803605 bin=OD1_GWC2_34_28 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KKP77023.1}; TaxID=1618629 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Campbellbacteria) bacterium GW2011_GWC1_35_31.;"
DolZOral124_scaffold_1382_18
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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15761..16423
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Paenibacillus sanguinis RepID=UPI0003679197
Nitroreductase family protein {ECO:0000313|EMBL:ERI91096.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
NAD(P)H-flavin oxidoreductase
DolZOral124_scaffold_1382_19

Not on your lists

comp(16545..16790)
DNA (246bp) protein (82aa)
Uridine kinase n=1 Tax=sediment metagenome RepID=D9PMW0_9ZZZZ
Uridine kinase {ECO:0000313|EMBL:EFK95102.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
DolZOral124_scaffold_1382_20

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16842..17480
DNA (639bp) protein (213aa)
Protein containing Peptidase M50 domain {ECO:0000313|EMBL:EFK95105.1}; EC=3.4.24.- {ECO:0000313|EMBL:EFK95105.1};; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;"
Protein containing Peptidase M50 domain n=1 Tax=sediment metagenome RepID=D9PMW3_9ZZZZ
peptidase M50
DolZOral124_scaffold_1382_21
RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated, Campbellbacteria, Parcubacteria, Bacteria

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17480..18190
DNA (711bp) protein (237aa)
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] id=5803064 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein Tax=RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated
16S rRNA methyltransferase
DolZOral124_scaffold_1382_22
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

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18370..18768
DNA (399bp) protein (133aa)
Tax=RBG_16_Chloroflexi_57_11_curated
DolZOral124_scaffold_1382_23
unknown

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18831..19169
DNA (339bp) protein (113aa)

This feature has no annotations

DolZOral124_scaffold_1382_24
GWF2_OD1_38_76, Parcubacteria, Bacteria

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comp(19569..20702)
DNA (1134bp) protein (378aa)
Putative membrane protein Tax=GWF2_OD1_38_76
YibE/F family protein id=43100 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
yibe/f family protein
DolZOral124_scaffold_1382_25
R_OD1_Kaiserbacteria_49_34, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

20830..21672
DNA (843bp) protein (281aa)
ATP-binding protein n=1 Tax=Streptomyces sulphureus RepID=UPI00030F92A9
cobyrinic acid ac-diamide synthase; K07321 CO dehydrogenase maturation factor Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_49_34_curated
ATP-binding protein
DolZOral124_scaffold_1382_26
unknown

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21757..22491
DNA (735bp) protein (245aa)

This feature has no annotations

DolZOral124_scaffold_1382_27
GWF2_OD1_44_8_partial, Parcubacteria, Bacteria

Not on your lists

comp(22637..22984)
DNA (348bp) protein (116aa)
Transcriptional regulator, Fur family n=3 Tax=Arcobacter butzleri RepID=A8EVL4_ARCB4
Ferric-uptake regulator {ECO:0000313|EMBL:KKT80021.1}; TaxID=1618971 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_44_8.;"
transcriptional regulator, Fur family
DolZOral124_scaffold_1382_28
R_OD1_Campbellbacteria_35_11, Campbellbacteria, Parcubacteria, Bacteria

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23054..23929
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI00036E5B4A
putative hydrolase (metallo-beta-lactamase superfamily) Tax=RIFCSPLOWO2_02_FULL_OD1_Campbellbacteria_35_11_curated
metallo-beta-lactamase
DolZOral124_scaffold_1382_29
GWE2_OD1_31_40, Nomurabacteria, Parcubacteria, Bacteria

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23972..25072
DNA (1101bp) protein (367aa)
Cell division protein FtsW Tax=GWE2_OD1_31_40
spoVE; stage V sporulation protein E; K03588 cell division protein FtsW id=5803520 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cell division/stage V sporulation protein
DolZOral124_scaffold_1382_30
unknown

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comp(25135..25401)
DNA (267bp) protein (89aa)

This feature has no annotations

Displaying items 1-30 of 43 in total

View Taxonomy