Alias: ACD25_356552.3120.5
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD25_15_1
uncultured bacterium, Bacteria
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Not on your lists |
comp(1..321)
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hypothetical protein
seg (db=Seg db_id=seg from=70 to=101)
RIBOSOMAL_S16 (db=PatternScan db_id=PS00732 from=3 to=12 evalue=0.0 interpro_id=IPR020592 interpro_description=Ribosomal protein S16, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
S16: ribosomal protein S16 (db=HMMTigr db_id=TIGR00002 from=3 to=80 evalue=3.3e-21 interpro_id=IPR000307 interpro_description=Ribosomal protein S16 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD25_15_2
uncultured bacterium, Bacteria
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Not on your lists |
543..815
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543..815 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD94907.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD25_15_3
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria
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Not on your lists |
comp(1182..1418)
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seg (db=Seg db_id=seg from=38 to=51)
ACP-like (db=superfamily db_id=SSF47336 from=1 to=77 evalue=3.5e-08 interpro_id=IPR009081 interpro_description=Acyl carrier protein-like GO=Molecular Function: acyl carrier activity (GO:0000036))
no description (db=Gene3D db_id=G3DSA:1.10.1200.10 from=3 to=78 evalue=8.5e-08)
Uncharacterized protein Tax=RIFOXYD2_FULL_WWE3_43_10_curated
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ACD25_15_4
uncultured bacterium, Bacteria
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Not on your lists |
comp(1411..1848)
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hypothetical protein
nusB: transcription antitermination factor N (db=HMMTigr db_id=TIGR01951 from=7 to=139 evalue=1.0e-42 interpro_id=IPR011605 interpro_description=NusB antitermination factor GO=Molecular Function: transcription termination factor activity (GO:0003715), Biological Process: transcription termination (GO:0006353))
NusB (db=HMMPfam db_id=PF01029 from=10 to=135 evalue=1.3e-33 interpro_id=IPR006027 interpro_description=NusB/RsmB/TIM44 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
NusB-like (db=superfamily db_id=SSF48013 from=7 to=136 evalue=4.1e-33 interpro_id=IPR006027 interpro_description=NusB/RsmB/TIM44 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
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ACD25_15_5
uncultured bacterium, Bacteria
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Not on your lists |
comp(1870..2016)
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Ribosomal_L32p (db=HMMPfam db_id=PF01783 from=2 to=42 evalue=7.1e-08 interpro_id=IPR002677 interpro_description=Ribosomal protein L32p GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
rpmF_bact: ribosomal protein L32 (db=HMMTigr db_id=TIGR01031 from=2 to=22 evalue=0.00055 interpro_id=IPR002677 interpro_description=Ribosomal protein L32p GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
Uncharacterized protein {ECO:0000313|EMBL:EKD94910.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD25_15_6
uncultured bacterium, Bacteria
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Not on your lists |
comp(2267..2443)
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2267..2443 - (rbs_motif=TAAT rbs_spacer=6bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD94911.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD25_15_7
uncultured bacterium, Bacteria
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Not on your lists |
comp(2655..3152)
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RNA methyltransferase, RsmD family
Cons_hypoth95 (db=HMMPfam db_id=PF03602 from=2 to=160 evalue=2.0e-30 interpro_id=IPR004398 interpro_description=Conserved hypothetical protein CHP00095)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=2 to=163 evalue=5.1e-28)
Predicted methylase, YhhF type (db=HMMPIR db_id=PIRSF004553 from=1 to=165 evalue=2.0e-16 interpro_id=IPR004398 interpro_description=Conserved hypothetical protein CHP00095)
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