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ACD25_49

Alias: ACD25_280495.14689.7

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD25_49_1
GWD2_WWE3_42_34, WWE3, Bacteria

Not on your lists

1..255
DNA (255bp) protein (85aa)
seg (db=Seg db_id=seg from=49 to=61)
Staphylococcal nuclease (db=superfamily db_id=SSF50199 from=1 to=81 evalue=9.4e-14 interpro_id=IPR016071 interpro_description=Staphylococcal nuclease (SNase-like), OB-fold GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788))
SNase (db=HMMPfam db_id=PF00565 from=4 to=78 evalue=1.1e-13 interpro_id=IPR006021 interpro_description=Staphylococcal nuclease (SNase-like) GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788))
no description (db=Gene3D db_id=G3DSA:2.40.50.90 from=2 to=79 evalue=7.3e-13 interpro_id=IPR006021 interpro_description=Staphylococcal nuclease (SNase-like) GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788))
ACD25_49_2
GWD2_WWE3_42_34, WWE3, Bacteria

Not on your lists

comp(259..750)
DNA (492bp) protein (164aa)
hypothetical protein
PYRUVATE KINASE (db=HMMPanther db_id=PTHR11817 from=1 to=162 evalue=3.6e-30 interpro_id=IPR001697 interpro_description=Pyruvate kinase GO=Molecular Function: magnesium ion binding (GO:0000287), Molecular Function: pyruvate kinase activity (GO:0004743), Biological Process: glycolysis (GO:0006096), Molecular Function: potassium ion binding (GO:0030955))
no description (db=Gene3D db_id=G3DSA:3.40.1380.20 from=1 to=163 evalue=2.1e-29 interpro_id=IPR015794 interpro_description=Pyruvate kinase, alpha/beta GO=Molecular Function: magnesium ion binding (GO:0000287), Molecular Function: pyruvate kinase activity (GO:0004743), Biological Process: glycolysis (GO:0006096), Molecular Function: potassium ion binding (GO:0030955))
PK C-terminal domain-like (db=superfamily db_id=SSF52935 from=14 to=163 evalue=4.7e-26 interpro_id=IPR015795 interpro_description=Pyruvate kinase, C-terminal-like)
ACD25_49_3
GWD2_WWE3_42_34, WWE3, Bacteria

Not on your lists

comp(750..1712)
DNA (963bp) protein (321aa)
hypothetical protein
seg (db=Seg db_id=seg from=299 to=313)
seg (db=Seg db_id=seg from=117 to=130)
PYRUVATE_KINASE (db=PatternScan db_id=PS00110 from=215 to=227 evalue=0.0 interpro_id=IPR018209 interpro_description=Pyruvate kinase, active site)
ACD25_49_4
GWD2_WWE3_42_34, WWE3, Bacteria

Not on your lists

comp(1722..2057)
DNA (336bp) protein (112aa)
hypothetical protein
seg (db=Seg db_id=seg from=3 to=17)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=30 to=52)
ACD25_49_5
GWD2_WWE3_42_34, WWE3, Bacteria

Not on your lists

2112..3308
DNA (1197bp) protein (399aa)
hypothetical protein
hypothetical protein
Beta-glucosidase A n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YCI2_DICT6 (db=UNIREF evalue=4.0e-80 bit_score=302.0 identity=40.25 coverage=96.2406015037594)
GLYCOSYL_HYDROL_F1_1 (db=PatternScan db_id=PS00572 from=308 to=316 evalue=0.0 interpro_id=IPR018120 interpro_description=Glycoside hydrolase, family 1, active site GO=Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553), Biological Process: carbohydrate metabolic process (GO:0005975))
ACD25_49_6

Not on your lists

3313..4395
DNA (1083bp) protein (361aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=27 to=49)
seg (db=Seg db_id=seg from=30 to=46)
(Trans)glycosidases (db=superfamily db_id=SSF51445 from=82 to=356 evalue=2.4e-15 interpro_id=IPR017853 interpro_description=Glycoside hydrolase, catalytic core)
hypothetical protein
ACD25_49_7
GWD2_WWE3_42_34, WWE3, Bacteria

Not on your lists

comp(4400..5215)
DNA (816bp) protein (272aa)
hypothetical protein
Actin-like ATPase domain (db=superfamily db_id=SSF53067 from=1 to=269 evalue=3.0e-28)
ROK (db=HMMPfam db_id=PF00480 from=4 to=183 evalue=8.6e-26 interpro_id=IPR000600 interpro_description=ROK)
ROK FAMILY (db=HMMPanther db_id=PTHR18964 from=61 to=270 evalue=6.5e-20)
ACD25_49_8

Not on your lists

comp(5216..5740)
DNA (525bp) protein (175aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B5X6_METEA (db=UNIREF evalue=1.0e-17 bit_score=92.0 identity=36.75 coverage=61.7142857142857)
seg (db=Seg db_id=seg from=14 to=30)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
ACD25_49_9
GWD2_WWE3_42_34, WWE3, Bacteria

Not on your lists

comp(5748..7088)
DNA (1341bp) protein (447aa)
5748..7088 - (rbs_motif=None rbs_spacer=None)
Tax=GWD2_WWE3_42_34
hypothetical protein
ACD25_49_10

Not on your lists

7134..7388
DNA (255bp) protein (85aa)
seg (db=Seg db_id=seg from=27 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=52 to=70)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
hypothetical protein
ACD25_49_11

Not on your lists

7419..8129
DNA (711bp) protein (237aa)
hypothetical protein
seg (db=Seg db_id=seg from=133 to=145)
seg (db=Seg db_id=seg from=5 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
ACD25_49_12
GWD2_WWE3_42_34, WWE3, Bacteria

Not on your lists

8142..8519
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=bacterium Ellin514 RepID=B9XEX1_9BACT (db=UNIREF evalue=4.0e-10 bit_score=67.0 identity=44.12 coverage=71.4285714285714)
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=49)
transmembrane_regions (db=TMHMM db_id=tmhmm from=62 to=84)
transmembrane_regions (db=TMHMM db_id=tmhmm from=88 to=105)
ACD25_49_13
GWD2_WWE3_42_34, WWE3, Bacteria

Not on your lists

comp(8508..10229)
DNA (1722bp) protein (574aa)
hypothetical protein
hypothetical protein
Histone acetyltransferase n=1 Tax=Cryptobacterium curtum DSM 15641 PF5_CRYCD">RepID=C7MPF5_CRYCD (db=UNIREF evalue=2.0e-120 bit_score=436.0 identity=42.36 coverage=92.5087108013937)
seg (db=Seg db_id=seg from=505 to=518)
ACD25_49_14
GWD2_WWE3_42_34, WWE3, Bacteria

Not on your lists

10233..10916
DNA (684bp) protein (228aa)
hypothetical protein
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=221 evalue=1.3e-32)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=49 to=153 evalue=3.4e-20)
Methyltransf_11 (db=HMMPfam db_id=PF08241 from=51 to=148 evalue=3.3e-16 interpro_id=IPR013216 interpro_description=Methyltransferase type 11 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
ACD25_49_15

Not on your lists

11377..12009
DNA (633bp) protein (211aa)
hypothetical protein
seg (db=Seg db_id=seg from=153 to=164)
PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE (db=HMMPanther db_id=PTHR11579 from=2 to=178 evalue=2.0e-48 interpro_id=IPR000682 interpro_description=Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO=Molecular Function: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity (GO:0004719), Biological Process: protein modification process (GO:0006464))
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=2 to=209 evalue=5.8e-48)
S-adenosyl-L-methionine + protein L-isoaspartate = S-adenosyl-L-homocysteine + protein L-isoaspartate alpha-methyl ester Jill Banfield (11/15/12)
ACD25_49_16

Not on your lists

comp(12006..12533)
DNA (528bp) protein (176aa)
seg (db=Seg db_id=seg from=13 to=32)
transmembrane_regions (db=TMHMM db_id=tmhmm from=139 to=158)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
hypothetical protein
ACD25_49_17

Not on your lists

comp(12604..14088)
DNA (1485bp) protein (495aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=335 to=354)
transmembrane_regions (db=TMHMM db_id=tmhmm from=361 to=383)
seg (db=Seg db_id=seg from=11 to=30)
seg (db=Seg db_id=seg from=111 to=125)
ACD25_49_18

Not on your lists

comp(14153..14722)
DNA (570bp) protein (190aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=82 to=104)
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=75)
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=54)
hypothetical protein
Displaying 18 items

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