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ACD25_57

Alias: ACD25_40515.5039.8

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD25_57_1

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comp(24..1016)
DNA (993bp) protein (331aa)
hypothetical protein
seg (db=Seg db_id=seg from=314 to=325)
Fic-like (db=superfamily db_id=SSF140931 from=74 to=262 evalue=5.0e-11)
Fic (db=HMMPfam db_id=PF02661 from=99 to=191 evalue=5.8e-06 interpro_id=IPR003812 interpro_description=Filamentation induced by cAMP/death on curing, related)
ACD25_57_2
GWD2_WWE3_42_34, WWE3, Bacteria

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comp(1046..2110)
DNA (1065bp) protein (355aa)
DNA replication and repair protein RecF
DNA replication and repair protein recF n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVC4_9BACT (db=UNIREF evalue=6.0e-100 bit_score=367.0 identity=52.6 coverage=97.1830985915493)
RECF_2 (db=PatternScan db_id=PS00618 from=304 to=322 evalue=0.0 interpro_id=IPR018078 interpro_description=DNA-binding, RecF, conserved site GO=Molecular Function: single-stranded DNA binding (GO:0003697), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281))
RECF_1 (db=PatternScan db_id=PS00617 from=122 to=142 evalue=0.0 interpro_id=IPR018078 interpro_description=DNA-binding, RecF, conserved site GO=Molecular Function: single-stranded DNA binding (GO:0003697), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281))
ACD25_57_3
GWD2_WWE3_42_34, WWE3, Bacteria

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comp(2107..2934)
DNA (828bp) protein (276aa)
Formamidopyrimidine-DNA glycosylase Fapy-DNA glycosylase
Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(Apurinic or apyrimidinic site) lyase mutM) (AP lyase mutM) n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVC5_9BACT (db=UNIREF evalue=1.0e-69 bit_score=266.0 identity=47.27 coverage=98.1884057971015)
ZF_FPG_1 (db=PatternScan db_id=PS01242 from=246 to=270 evalue=0.0 interpro_id=IPR015887 interpro_description=DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-(apurinic or apyrimidinic site) lyase activity (GO:0003906), Biological Process: DNA repair (GO:0006281), Molecular Function: zinc ion binding (GO:0008270), Molecular Function: hydrolase activity, hydrolyzing N-glycosyl compounds (GO:0016799))
fpg: formamidopyrimidine-DNA glycosylase (db=HMMTigr db_id=TIGR00577 from=1 to=270 evalue=7.7e-78 interpro_id=IPR000191 interpro_description=DNA glycosylase/AP lyase GO=Molecular Function: DNA-(apurinic or apyrimidinic site) lyase activity (GO:0003906), Biological Process: DNA repair (GO:0006281), Molecular Function: zinc ion binding (GO:0008270), Molecular Function: oxidized purine base lesion DNA N-glycosylase activity (GO:0008534))
ACD25_57_4

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comp(2927..4048)
DNA (1122bp) protein (374aa)
hypothetical protein
GLYCOSYL TRANSFERASE (db=HMMPanther db_id=PTHR12526:SF21 from=5 to=372 evalue=1.9e-95)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=5 to=372 evalue=1.9e-95)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=5 to=373 evalue=2.1e-47)
ACD25_57_5

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4113..4613
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVC7_9BACT (db=UNIREF evalue=2.0e-11 bit_score=71.6 identity=30.37 coverage=77.8443113772455)
seg (db=Seg db_id=seg from=5 to=25)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
hypothetical protein
ACD25_57_6
GWD2_WWE3_42_34, WWE3, Bacteria

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4826..5071
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVC8_9BACT (db=UNIREF evalue=4.0e-25 bit_score=116.0 identity=59.76 coverage=97.5609756097561)
hypothetical protein
Putative uncharacterized protein Tax=GWD2_WWE3_42_34
Displaying 6 items

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