ggKbase home page

ACD25_64

Alias: ACD25_106074.7373.6

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD25_64_1
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(2..430)
DNA (429bp) protein (143aa)
hypothetical protein
ROK (db=HMMPfam db_id=PF00480 from=4 to=140 evalue=8.9e-19 interpro_id=IPR000600 interpro_description=ROK)
Actin-like ATPase domain (db=superfamily db_id=SSF53067 from=1 to=119 evalue=3.0e-17)
GLUCOSE KINASE (db=HMMPanther db_id=PTHR18964:SF37 from=61 to=139 evalue=2.3e-12)
ACD25_64_2
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(431..973)
DNA (543bp) protein (181aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B5X6_METEA (db=UNIREF evalue=5.0e-14 bit_score=80.5 identity=33.91 coverage=58.5635359116022)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
seg (db=Seg db_id=seg from=18 to=30)
ACD25_64_3
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(981..2321)
DNA (1341bp) protein (447aa)
seg (db=Seg db_id=seg from=126 to=143)
seg (db=Seg db_id=seg from=200 to=208)
Uncharacterized protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
ACD25_64_4
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

2367..2621
DNA (255bp) protein (85aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=53 to=70)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
seg (db=Seg db_id=seg from=27 to=35)
hypothetical protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
ACD25_64_5

Not on your lists

2652..3368
DNA (717bp) protein (239aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
seg (db=Seg db_id=seg from=133 to=145)
CSA_PPIASE_1 (db=PatternScan db_id=PS00170 from=117 to=134 evalue=0.0 interpro_id=IPR020892 interpro_description=Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site GO=Molecular Function: peptidyl-prolyl cis-trans isomerase activity (GO:0003755), Biological Process: protein folding (GO:0006457))
ACD25_64_6
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

3391..3783
DNA (393bp) protein (131aa)
seg (db=Seg db_id=seg from=68 to=84)
transmembrane_regions (db=TMHMM db_id=tmhmm from=38 to=55)
transmembrane_regions (db=TMHMM db_id=tmhmm from=70 to=104)
Tic20 (db=HMMPfam db_id=PF09685 from=37 to=127 evalue=5.4e-13 interpro_id=IPR019109 interpro_description=Uncharacterised conserved protein ycf60 GO=Cellular Component: integral to membrane (GO:0016021))
ACD25_64_7
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(3772..5493)
DNA (1722bp) protein (574aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC78_9ACTN (db=UNIREF evalue=1.0e-121 bit_score=440.0 identity=39.78 coverage=99.6515679442509)
seg (db=Seg db_id=seg from=505 to=518)
coiled-coil (db=Coil db_id=coil from=418 to=439 evalue=NA)
ACD25_64_8
RIFOXYC1_FULL_WWE3_42_13_curated, WWE3, Bacteria

Not on your lists

5496..5663
DNA (168bp) protein (56aa)
5496..5663 + (rbs_motif=None rbs_spacer=None)
Methyltransferase protein Tax=RIFOXYC1_FULL_WWE3_42_13_curated
ACD25_64_9
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

5644..6300
DNA (657bp) protein (219aa)
hypothetical protein
seg (db=Seg db_id=seg from=198 to=208)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=190 evalue=5.5e-28)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=51 to=155 evalue=7.2e-17)
ACD25_64_10
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

6305..6412
DNA (108bp) protein (36aa)
6305..6412 + (rbs_motif=None rbs_spacer=None)
putative methyltransferase Tax=RIFOXYC1_FULL_WWE3_42_17_curated
ACD25_64_11
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

6409..6777
DNA (369bp) protein (123aa)
Histidine triad protein
HIT-like (db=superfamily db_id=SSF54197 from=2 to=122 evalue=8.5e-25 interpro_id=IPR011146 interpro_description=Histidine triad-like motif GO=Molecular Function: catalytic activity (GO:0003824))
no description (db=Gene3D db_id=G3DSA:3.30.428.10 from=3 to=109 evalue=1.5e-16 interpro_id=IPR011151 interpro_description=Histidine triad motif GO=Molecular Function: catalytic activity (GO:0003824))
HISTRIAD (db=FPrintScan db_id=PR00332 from=5 to=21 evalue=7.7e-11 interpro_id=IPR001310 interpro_description=Histidine triad (HIT) protein)
ACD25_64_12
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

6774..7406
DNA (633bp) protein (211aa)
hypothetical protein
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=2 to=209 evalue=5.1e-48)
PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE (db=HMMPanther db_id=PTHR11579 from=2 to=178 evalue=1.5e-46 interpro_id=IPR000682 interpro_description=Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO=Molecular Function: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity (GO:0004719), Biological Process: protein modification process (GO:0006464))
PCMT (db=HMMPfam db_id=PF01135 from=2 to=183 evalue=1.5e-44 interpro_id=IPR000682 interpro_description=Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO=Molecular Function: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity (GO:0004719), Biological Process: protein modification process (GO:0006464))
Displaying 12 items

View Taxonomy