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ACD25_80

Alias: ACD25_82444.4654.7

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD25_80_1

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comp(2..97)
DNA (96bp) protein (32aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Na+/Ca+ antiporter, CaCA family
Na+/Ca+ antiporter, CaCA family {ECO:0000313|EMBL:AHB40655.1}; TaxID=1394710 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium RAAC2_WWE3_1.;"
ACD25_80_2

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comp(154..702)
DNA (549bp) protein (183aa)
seg (db=Seg db_id=seg from=12 to=25)
transmembrane_regions (db=TMHMM db_id=tmhmm from=159 to=181)
transmembrane_regions (db=TMHMM db_id=tmhmm from=124 to=146)
seg (db=Seg db_id=seg from=103 to=120)
ACD25_80_3

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780..2366
DNA (1587bp) protein (529aa)
hypothetical protein
Glycosyl transferase family 39 n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NRG7_ROSCS (db=UNIREF evalue=3.0e-07 bit_score=60.8 identity=23.14 coverage=59.3572778827977)
transmembrane_regions (db=TMHMM db_id=tmhmm from=223 to=245)
transmembrane_regions (db=TMHMM db_id=tmhmm from=274 to=296)
ACD25_80_4
GWD2_WWE3_42_34, WWE3, Bacteria

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comp(2350..2820)
DNA (471bp) protein (157aa)
hypothetical protein
SIGMA70_2 (db=PatternScan db_id=PS00716 from=117 to=143 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=54 to=156 evalue=2.0e-28 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=78 to=156 evalue=9.8e-27 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
ACD25_80_5

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3029..3364
DNA (336bp) protein (112aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=69)
Uncharacterized protein {ECO:0000313|EMBL:EKD94699.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD25_80_6

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3510..3647
DNA (138bp) protein (46aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=40)
Uncharacterized protein {ECO:0000313|EMBL:EKD94700.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD25_80_7

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comp(3661..4686)
DNA (1026bp) protein (342aa)
hypothetical protein
seg (db=Seg db_id=seg from=325 to=338)
coiled-coil (db=Coil db_id=coil from=300 to=321 evalue=NA)
DNA primase core (db=superfamily db_id=SSF56731 from=3 to=171 evalue=3.5e-34)
Displaying 7 items

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