ggKbase home page

ar4r2_scaffold_1519

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1519_1
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(1..1371)
DNA (1371bp) protein (457aa)
hypothetical protein id=49817 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
hypothetical protein Tax=ACD3
ar4r2_scaffold_1519_2
ACD3, Gracilibacteria, Bacteria

Not on your lists

1502..2263
DNA (762bp) protein (254aa)
Transcriptional regulator, TrmB
coiled-coil 81..102 id=49536 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
coiled-coil 81..102 Tax=ACD3
ar4r2_scaffold_1519_3
ACD3, Gracilibacteria, Bacteria

Not on your lists


comp(2295..3281)
DNA (987bp) protein (329aa)
Protein RecA n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FV90_9BACT rbh
sal:Sala_1725 recA; recombinase A; K03553 recombination protein RecA Tax=ACD3
recA; recombinase A
ar4r2_scaffold_1519_4
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(3473..3697)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F6Y1_9BACT
hypothetical protein Tax=ACD4
ar4r2_scaffold_1519_5

Not on your lists

comp(3720..4328)
DNA (609bp) protein (203aa)
exonuclease RNase T and DNA polymerase III; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] id=33828 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Exonuclease RNase T and DNA polymerase III; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
Uncharacterized protein {ECO:0000313|EMBL:EKD29352.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_1519_6
R_OP11_Roizmanbacteria_39_24, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(4435..4779)
DNA (345bp) protein (115aa)
cold-inducible RNA-binding protein (EC:1.4.3.6) Tax=RIFCSPHIGHO2_01_FULL_OP11_Roizmanbacteria_39_24_curated
UPI0003D06B87 related cluster n=1 Tax=unknown RepID=UPI0003D06B87
hypothetical protein
ar4r2_scaffold_1519_7

Not on your lists

4955..6052
DNA (1098bp) protein (366aa)
Polysaccharide pyruvyl transferase n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AX48_9BACT
Polysaccharide pyruvyl transferase {ECO:0000313|EMBL:EKD66357.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_1519_8
ACD49, Gracilibacteria, Bacteria

Not on your lists

6043..6657
DNA (615bp) protein (205aa)
putative 3-methyladenine DNA glycosylase; K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21] Tax=ACD49
putative 3-methyladenine DNA glycosylase (EC:3.2.2.-)
Putative 3-methyladenine DNA glycosylase n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FB26_9BACT
ar4r2_scaffold_1519_9
unknown

Not on your lists

comp(6654..6980)
DNA (327bp) protein (109aa)

This feature has no annotations

ar4r2_scaffold_1519_10
unknown

Not on your lists

comp(7053..8045)
DNA (993bp) protein (331aa)

This feature has no annotations

ar4r2_scaffold_1519_11
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(8153..8749)
DNA (597bp) protein (199aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GUD8_9BACT
Tax=ACD4
ar4r2_scaffold_1519_12
ACD80, ACD80, ACD80, ACD80, SR1, Bacteria

Not on your lists

comp(8921..9322)
DNA (402bp) protein (134aa)
Nuc_deoxyrib_tr 28..104 id=132763 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
Nuc_deoxyrib_tr 28..104 id=132763 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
ar4r2_scaffold_1519_13
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9469..10524)
DNA (1056bp) protein (352aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
pheS; phenylalanine--tRNA ligase, alpha subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=2 Tax=Ruminococcus lactaris RepID=B5CQV1_9FIRM
ar4r2_scaffold_1519_14
ACD3, Gracilibacteria, Bacteria

Not on your lists

10711..11175
DNA (465bp) protein (155aa)
seg 5..21 id=49380 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
seg 5..21 Tax=ACD3
ar4r2_scaffold_1519_15
unknown

Not on your lists

11201..12139
DNA (939bp) protein (313aa)

This feature has no annotations

ar4r2_scaffold_1519_16
Streptobacillus moniliformis, Streptobacillus, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

12150..12866
DNA (717bp) protein (239aa)
uridylate kinase (EC:2.7.4.22)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
Uridylate kinase n=1 Tax=Streptobacillus moniliformis (strain ATCC 14647 / DSM 12112 / NCTC 10651 / 9901) RepID=D1AWM5_STRM9
ar4r2_scaffold_1519_17
unknown

Not on your lists

13017..13247
DNA (231bp) protein (77aa)

This feature has no annotations

ar4r2_scaffold_1519_18

Not on your lists

13458..15260
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AX14_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD29547.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_1519_19
unknown

Not on your lists

15429..16559
DNA (1131bp) protein (377aa)

This feature has no annotations

ar4r2_scaffold_1519_20
unknown

Not on your lists

16655..17893
DNA (1239bp) protein (413aa)

This feature has no annotations

ar4r2_scaffold_1519_21
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(17946..18857)
DNA (912bp) protein (304aa)
Methicillin resistance protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F5P6_9BACT
methicillin resistance protein Tax=ACD4
femA; femA protein
ar4r2_scaffold_1519_22

Not on your lists

comp(18860..20029)
DNA (1170bp) protein (390aa)
uridine kinase (EC:2.7.1.48)
Adenylate cyclase n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JDU1_9BACT id=35244 bin=ACD2 species=Verrucomicrobiae bacterium DG1235 genus=unknown taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Adenylate cyclase {ECO:0000313|EMBL:KKT53669.1}; TaxID=1618930 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_22.;"
ar4r2_scaffold_1519_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20040..20453)
DNA (414bp) protein (138aa)
MutT/nudix family protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BB10_CLOBO id=49453 bin=ACD3 species=Clostridium botulinum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
MutT/nudix family protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BB10_CLOBO id=49453 bin=ACD3 species=Clostridium botulinum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
ar4r2_scaffold_1519_24
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(20472..21476)
DNA (1005bp) protein (335aa)
tjr:TherJR_1182 Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB id=51042 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
dae:Dtox_1111 ruvB; Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB Tax=ACD49
Holliday junction ATP-dependent DNA helicase ruvB
ar4r2_scaffold_1519_25

Not on your lists

21727..23220
DNA (1494bp) protein (498aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1234023 species="Bacteria; environmental sample
has:Halsa_1274 metal dependent phosphohydrolase; K06950 id=69476 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
metal dependent phosphohydrolase
ar4r2_scaffold_1519_26
ACD2, Gracilibacteria, Bacteria

Not on your lists

23250..24047
DNA (798bp) protein (266aa)
transmembrane_regions 7..29 id=49776 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
transmembrane_regions 195..217 Tax=ACD2
ar4r2_scaffold_1519_27
ACD49, Gracilibacteria, Bacteria

Not on your lists

24017..25531
DNA (1515bp) protein (505aa)
ComEC-like cytoplasmic membrane protein ; K02238 competence protein ComEC id=69470 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
ComEC-like cytoplasmic membrane protein ; K02238 competence protein ComEC Tax=ACD49
competence membrane protein; K02238 competence protein ComEC
ar4r2_scaffold_1519_28
unknown

Not on your lists

25595..27910
DNA (2316bp) protein (772aa)

This feature has no annotations

ar4r2_scaffold_1519_29
unknown

Not on your lists

28032..28358
DNA (327bp) protein (109aa)

This feature has no annotations

Displaying 29 items

View Taxonomy