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ar4r2_scaffold_1585

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1585_1
unknown

Not on your lists

comp(67..690)
DNA (624bp) protein (208aa)

This feature has no annotations

ar4r2_scaffold_1585_2
ACD80, SR1, Bacteria

Not on your lists

comp(692..1720)
DNA (1029bp) protein (343aa)
transcription termination factor NusA; K02600 N utilization substance protein A id=132315 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
transcription termination factor NusA; K02600 N utilization substance protein A Tax=ACD80
hypothetical protein
ar4r2_scaffold_1585_3
ACD80, SR1, Bacteria

Not on your lists

comp(1812..3134)
DNA (1323bp) protein (441aa)
putative oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] id=132310 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
putative oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] Tax=ACD80
hemN; coproporphyrinogen III oxidase (EC:1.3.3.3 1.3.99.22)
ar4r2_scaffold_1585_4
ACD80, SR1, Bacteria

Not on your lists

comp(3284..4159)
DNA (876bp) protein (292aa)
putative PAS/PAC sensor protein id=132314 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
putative PAS/PAC sensor protein Tax=ACD80
NtrC family signal transduction histidine kinase
ar4r2_scaffold_1585_5
ACD80, SR1, Bacteria

Not on your lists

comp(4297..5640)
DNA (1344bp) protein (448aa)
putative tRNA modifying protein id=132313 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
putative tRNA modifying protein Tax=ACD80
hypothetical protein
ar4r2_scaffold_1585_6
ACD80, SR1, Bacteria

Not on your lists

comp(5704..7110)
DNA (1407bp) protein (469aa)
nam:NAMH_0322 atpD; F0F1 ATP synthase subunit beta (EC:3.6.3.14); K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] id=982467 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1 rbh
str:Sterm_0203 ATP synthase F1, beta subunit (EC:3.6.3.14); K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] Tax=ACD80
hypothetical protein
ar4r2_scaffold_1585_7
ACD80, SR1, Bacteria

Not on your lists

comp(7238..8134)
DNA (897bp) protein (299aa)
ATP synthase F1, gamma subunit; K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] id=131816 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
ATP synthase F1, gamma subunit; K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] Tax=ACD80
atpG; F0F1 ATP synthase subunit gamma (EC:3.6.3.14)
ar4r2_scaffold_1585_8
ACD80, SR1, Bacteria

Not on your lists

comp(8213..8671)
DNA (459bp) protein (153aa)
ATP synthase epsilon chain n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YHG5_9BACT
coiled-coil 103..124 Tax=ACD80
hypothetical protein
ar4r2_scaffold_1585_9
ACD80, SR1, Bacteria

Not on your lists

comp(8737..10236)
DNA (1500bp) protein (500aa)
ttr:Tter_0065 ATP synthase F1, alpha subunit (EC:3.6.3.14); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] id=131814 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
ttr:Tter_0065 ATP synthase F1, alpha subunit (EC:3.6.3.14); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] Tax=ACD80
hypothetical protein
ar4r2_scaffold_1585_10
unknown

Not on your lists

comp(10264..10716)
DNA (453bp) protein (151aa)

This feature has no annotations

ar4r2_scaffold_1585_11
ACD80, SR1, Bacteria

Not on your lists

comp(10741..11214)
DNA (474bp) protein (158aa)
UPI0003CFFBF9 related cluster n=1 Tax=unknown RepID=UPI0003CFFBF9
ATP synthase subunit b
coiled-coil 36..68 Tax=ACD80
ar4r2_scaffold_1585_12
Methanocaldococcus sp. FS406-22, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(11297..11749)
DNA (453bp) protein (151aa)
H(+)-transporting two-sector ATPase {ECO:0000313|EMBL:ADC68702.1}; EC=3.6.3.14 {ECO:0000313|EMBL:ADC68702.1};; TaxID=644281 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldo
ATP synthase F0 subunit C id=982474 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
ATP synthase F0 subunit C
ar4r2_scaffold_1585_13
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11809..12663)
DNA (855bp) protein (285aa)
hypothetical protein
transmembrane_regions 78..100 id=982475 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
ar4r2_scaffold_1585_14
ACD80, SR1, Bacteria

Not on your lists

comp(12831..14483)
DNA (1653bp) protein (551aa)
lbu:LBUL_0549 excinuclease ABC subunit B; K03702 excinuclease ABC subunit B id=132312 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
lbu:LBUL_0549 excinuclease ABC subunit B; K03702 excinuclease ABC subunit B Tax=ACD80
hypothetical protein
Displaying 14 items

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