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ar4r2_scaffold_312

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_312_1
ACD80, SR1, Bacteria

Not on your lists

comp(143..679)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XVR0_9BACT
seg 3..31 Tax=ACD80
membrane protein
ar4r2_scaffold_312_2

Not on your lists

comp(839..1339)
DNA (501bp) protein (167aa)
hypothetical protein; K06992 id=9119 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:EKE11259.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ar4r2_scaffold_312_3

Not on your lists

comp(2048..3331)
DNA (1284bp) protein (428aa)
dsa:Desal_1305 glycine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] id=132396 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
hypothetical protein
ar4r2_scaffold_312_4
unknown

Not on your lists

3602..4057
DNA (456bp) protein (152aa)

This feature has no annotations

ar4r2_scaffold_312_5
ACD80, SR1, Bacteria

Not on your lists

comp(4141..4542)
DNA (402bp) protein (134aa)
transmembrane_regions 5..27 id=132495 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
transmembrane_regions 5..27 Tax=ACD80
ar4r2_scaffold_312_6
unknown

Not on your lists

comp(4548..5048)
DNA (501bp) protein (167aa)
transmembrane_regions 5..27 id=132495 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
ar4r2_scaffold_312_7
ACD80, SR1, Bacteria

Not on your lists

comp(5114..6496)
DNA (1383bp) protein (461aa)
sli:Slin_5651 GH3 auxin-responsive promoter id=132496 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
sli:Slin_5651 GH3 auxin-responsive promoter Tax=ACD80
hypothetical protein
ar4r2_scaffold_312_8
unknown

Not on your lists

6814..9330
DNA (2517bp) protein (839aa)
Phenylalanyl-tRNA synthetase beta chain n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G985_9FIRM id=131907 bin=ACD80 species=Dorea formicigenerans genus=Dorea taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD80 organism_group=SR1 rbh
Phenylalanyl-tRNA synthetase beta chain n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G985_9FIRM Tax=ACD80
hypothetical protein
ar4r2_scaffold_312_9
ACD80, SR1, Bacteria

Not on your lists

comp(9565..10122)
DNA (558bp) protein (186aa)
hypothetical protein id=131889 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
hypothetical protein Tax=ACD80
ar4r2_scaffold_312_10

Not on your lists

10292..10510
DNA (219bp) protein (73aa)
cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family) id=131905 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
Uncharacterized protein {ECO:0000313|EMBL:EKD25506.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
DNA-binding cold-shock protein
ar4r2_scaffold_312_11
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(10629..11264)
DNA (636bp) protein (212aa)
ribonuclease h (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=CG_Wolfe_01
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJ93_FUSVA id=2880 bin=ACD11 species=Fusobacterium varium genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
ar4r2_scaffold_312_12
ACD80, SR1, Bacteria

Not on your lists

comp(11356..11877)
DNA (522bp) protein (174aa)
hypothetical protein Tax=ACD80
hypothetical protein id=131899 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
ar4r2_scaffold_312_13
ACD80, SR1, Bacteria

Not on your lists

comp(11878..13461)
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XYT7_9BACT rbh
type II secretion system protein E; K02454 general secretion pathway protein E Tax=ACD80
hypothetical protein
ar4r2_scaffold_312_14
ACD80, SR1, Bacteria

Not on your lists

13518..14117
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XWH5_9BACT
hypothetical protein Tax=ACD80
ar4r2_scaffold_312_15
ACD80, SR1, Bacteria

Not on your lists

14378..17026
DNA (2649bp) protein (883aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XI32_9BACT rbh
thx:Thet_1289 DNA mismatch repair protein MutS Tax=ACD80
hypothetical protein
ar4r2_scaffold_312_16
ACD80, SR1, Bacteria

Not on your lists

comp(17028..17801)
DNA (774bp) protein (258aa)
rsuA; pseudouridylate synthase; K06178 ribosomal large subunit pseudouridine synthase B [EC:5.4.99.12] id=132048 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
rsuA; pseudouridylate synthase; K06178 ribosomal large subunit pseudouridine synthase B [EC:5.4.99.12] Tax=ACD80
Pseudouridylate synthase
ar4r2_scaffold_312_17
unknown

Not on your lists

comp(17943..18221)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=candidate division OP11 bacterium UW 659-4-B07 RepID=UPI0003625CDF
ar4r2_scaffold_312_18
ACD80, SR1, Bacteria

Not on your lists

18351..20525
DNA (2175bp) protein (725aa)
hypothetical protein
seg 23..36 id=132043 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
seg 23..36 Tax=ACD80
ar4r2_scaffold_312_19
ACD80, SR1, Bacteria

Not on your lists

20532..21527
DNA (996bp) protein (332aa)
hypothetical protein
seg 90..101 id=982984 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1 rbh
hypothetical protein Tax=ACD80
ar4r2_scaffold_312_20
ACD80, SR1, Bacteria

Not on your lists

21545..22321
DNA (777bp) protein (259aa)
Methyltransferase type 11 n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XXF3_9BACT rbh
Adenylate cyclase
methyltransferase type 11 Tax=ACD80
ar4r2_scaffold_312_21
ACD80, SR1, Bacteria

Not on your lists

22367..22933
DNA (567bp) protein (189aa)
hypothetical protein
seg 24..45 id=132655 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
seg 24..45 Tax=ACD80
ar4r2_scaffold_312_22
unknown

Not on your lists

comp(23127..24029)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=candidate division OP11 bacterium UW 659-4-B07 RepID=UPI000382E5E6
ar4r2_scaffold_312_23
unknown

Not on your lists

comp(24159..24527)
DNA (369bp) protein (123aa)

This feature has no annotations

ar4r2_scaffold_312_24
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24597..24893)
DNA (297bp) protein (99aa)
tRNA/rRNA methyltransferase (SpoU) id=132660 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:EHQ01252.1}; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limna
ar4r2_scaffold_312_25
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

Not on your lists

comp(25116..25742)
DNA (627bp) protein (209aa)
UPI0003CFFA03 related cluster n=1 Tax=unknown RepID=UPI0003CFFA03 rbh
hypothetical protein
hypothetical protein Tax=RIFOXYB2_FULL_RIF07_49_35_curated
ar4r2_scaffold_312_26
Flavobacteria bacterium BAL38, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25804..26547)
DNA (744bp) protein (248aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Prevotella marshii DSM 16973 RepID=E0NVJ6_9BACT id=982485 bin=RAAC1_SR1 species=Prevotella marshii genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=RAAC1_SR1 organism_group=SR1
Monofunctional biosynthetic peptidoglycan transglycosylase
ar4r2_scaffold_312_27

Not on your lists

26929..28032
DNA (1104bp) protein (368aa)
dihydrouridine synthase TIM-barrel protein nifR3 n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002627AF0 id=982989 bin=RAAC1_SR1 species=SAR324 cluster bacterium JCVI-SC AAA005 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RAAC1_SR1 organism_group=SR1
dihydrouridine synthase TIM-barrel protein nifR3
tRNA-U20-dihydrouridine synthase {ECO:0000313|EMBL:EKD56447.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ar4r2_scaffold_312_28
unknown

Not on your lists

comp(28045..28377)
DNA (333bp) protein (111aa)

This feature has no annotations

ar4r2_scaffold_312_29
ACD80, SR1, Bacteria

Not on your lists

28485..29537
DNA (1053bp) protein (351aa)
primosomal protein N'; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.1.-] id=132730 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
primosomal protein N'; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.1.-] Tax=ACD80
hypothetical protein
ar4r2_scaffold_312_30
unknown

Not on your lists

comp(29694..30251)
DNA (558bp) protein (186aa)

This feature has no annotations

Displaying items 1-30 of 41 in total

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