ggKbase home page

ACD26_17

Alias: ACD26_34983.2418.8

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD26_17_1

Not on your lists

1..96
DNA (96bp) protein (32aa)
L,D-transpeptidase catalytic domain-like (db=superfamily db_id=SSF141523 from=1 to=31 evalue=4.6e-08)
YkuD (db=HMMPfam db_id=PF03734 from=4 to=30 evalue=6.7e-05 interpro_id=IPR005490 interpro_description=YkuD domain)
Uncharacterized protein {ECO:0000313|EMBL:EKD94343.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD26_17_2

Not on your lists

299..736
DNA (438bp) protein (146aa)
transposase (db=KEGG evalue=2.0e-13 bit_score=77.8 identity=36.97 coverage=80.1369863013699)
Transposase {ECO:0000313|EMBL:EKD94344.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Transposase IS66 n=2 Tax=Clostridium RepID=G7MA26_9CLOT
ACD26_17_3
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

940..1533
DNA (594bp) protein (198aa)
Rep_3 (db=HMMPfam db_id=PF01051 from=43 to=88 evalue=2.6e-10 interpro_id=IPR000525 interpro_description=Initiator Rep protein GO=Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Cellular Component: extrachromosomal circular DNA (GO:0005727), Biological Process: DNA replication initiation (GO:0006270))
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=47 to=92 evalue=6.0e-10)
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=47 to=97 evalue=2.4e-07 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
initiator RepB protein
ACD26_17_4

Not on your lists

1610..2110
DNA (501bp) protein (167aa)
coiled-coil (db=Coil db_id=coil from=80 to=108 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKD94340.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD26_17_5

Not on your lists

2165..2419
DNA (255bp) protein (85aa)
prevent-host-death protein
Prevent-host-death protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AZT3_SYNWW (db=UNIREF evalue=5.0e-21 bit_score=103.0 identity=60.71 coverage=97.6470588235294)
coiled-coil (db=Coil db_id=coil from=54 to=75 evalue=NA)
YefM-like (db=superfamily db_id=SSF143120 from=1 to=82 evalue=1.9e-21)
ACD26_17_6

Not on your lists

2382..2450
DNA (69bp) protein (23aa)
2382..2450 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD94342.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 6 items

View Taxonomy