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ACD26_19

Alias: ACD26_189.4092.14

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD26_19_1

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208..753
DNA (546bp) protein (182aa)
coiled-coil (db=Coil db_id=coil from=102 to=123 evalue=NA)
HTH_8 (db=HMMPfam db_id=PF02954 from=5 to=26 evalue=0.00011 interpro_id=IPR002197 interpro_description=Helix-turn-helix, Fis-type GO=Molecular Function: transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
Uncharacterized protein {ECO:0000313|EMBL:EKD94429.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD26_19_2

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794..1357
DNA (564bp) protein (188aa)
hypothetical protein
Restriction endonuclease-like (db=superfamily db_id=SSF52980 from=1 to=186 evalue=4.5e-46 interpro_id=IPR011335 interpro_description=Restriction endonuclease, type II-like GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:3.90.1570.10 from=10 to=186 evalue=1.6e-21 interpro_id=IPR012296 interpro_description=Nuclease, putative, TT1808)
DUF820 (db=HMMPfam db_id=PF05685 from=43 to=151 evalue=1.6e-21 interpro_id=IPR008538 interpro_description=Protein of unknown function DUF820)
ACD26_19_3

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comp(1512..2483)
DNA (972bp) protein (324aa)
protein involved in initiation of plasmid replication
Initiator RepB protein family n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BVH8_CLOPE (db=UNIREF evalue=4.0e-28 bit_score=129.0 identity=41.07 coverage=66.6666666666667)
coiled-coil (db=Coil db_id=coil from=230 to=266 evalue=NA)
seg (db=Seg db_id=seg from=32 to=43)
ACD26_19_4

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2484..2657
DNA (174bp) protein (58aa)
seg (db=Seg db_id=seg from=29 to=47)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein {ECO:0000313|EMBL:EKD94432.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD26_19_5

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comp(3079..4128)
DNA (1050bp) protein (350aa)
protein involved in initiation of plasmid replication
Initiator RepB protein n=1 Tax=Bacillus pseudofirmus OF4 RepID=D3G1X2_BACPE (db=UNIREF evalue=3.0e-22 bit_score=109.0 identity=38.79 coverage=44.8571428571429)
seg (db=Seg db_id=seg from=178 to=197)
Rep_3 (db=HMMPfam db_id=PF01051 from=11 to=197 evalue=6.1e-39 interpro_id=IPR000525 interpro_description=Initiator Rep protein GO=Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Cellular Component: extrachromosomal circular DNA (GO:0005727), Biological Process: DNA replication initiation (GO:0006270))
Displaying 5 items

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