ggKbase home page

scnpilot_p_inoc_scaffold_86

Search features with annotation key words

Displaying items 1-30 of 321 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_86_1
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..1544)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SGB3_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL80848.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp.
scnpilot_p_inoc_scaffold_86_2
unknown

Not on your lists

comp(1501..1767)
DNA (267bp) protein (89aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_86_3
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

2372..2623
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RVS1_9BACT
hypothetical protein Tax=CG_TM7_01
hypothetical protein
scnpilot_p_inoc_scaffold_86_4
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(2749..5286)
DNA (2538bp) protein (846aa)
cation-transporting ATPase, E1-E2 family; K01537 Ca2+-transporting ATPase [EC:3.6.3.8] Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
Calcium-translocating P-type ATPase, PMCA-type (Fragment) id=2440171 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
hypothetical protein
scnpilot_p_inoc_scaffold_86_5
unknown

Not on your lists

5372..5875
DNA (504bp) protein (168aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_86_6
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(5996..6484)
DNA (489bp) protein (163aa)
greA; transcription elongation factor GreA; K03624 transcription elongation factor GreA Tax=CG_TM7_01
Transcription elongation factor GreA id=2440173 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Transcription elongation factor greA
scnpilot_p_inoc_scaffold_86_7
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(6594..7265)
DNA (672bp) protein (224aa)
ABC transporter related protein id=2440175 bin=GWC2_TM7_44_17 species=Stackebrandtia nassauensis genus=Stackebrandtia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
ABC transporter-like protein
Tax=BJP_IG2103_TM7_39_1400
scnpilot_p_inoc_scaffold_86_8
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(7277..8659)
DNA (1383bp) protein (461aa)
Putative ABC transporter permease protein id=2440176 bin=GWC2_TM7_44_17 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
ABC transporter permease
Tax=BJP_IG2103_TM7_39_1400
scnpilot_p_inoc_scaffold_86_9
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(8707..9759)
DNA (1053bp) protein (351aa)
putative Histidine kinase (EC:2.7.13.3) Tax=GWC2_TM7_44_17_curated
Integral membrane sensor signal transduction histidine kinase id=2440177 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
integral membrane sensor signal transduction histidine kinase
scnpilot_p_inoc_scaffold_86_10
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(9772..10449)
DNA (678bp) protein (226aa)
two component transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
Two component transcriptional regulator, winged helix family id=2440178 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
two component transcriptional regulator, winged helix family protein
scnpilot_p_inoc_scaffold_86_11
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(10495..10815)
DNA (321bp) protein (107aa)
Uncharacterized protein id=2440179 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein Tax=GWC2_TM7_44_17_curated
hypothetical protein
scnpilot_p_inoc_scaffold_86_12
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(10845..12509)
DNA (1665bp) protein (555aa)
Oxidoreductase (Fragment) id=2440180 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
putative oxidoreductase Tax=GWC2_TM7_44_17_curated
Oxidoreductase
scnpilot_p_inoc_scaffold_86_13
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

12568..13713
DNA (1146bp) protein (382aa)
Putative uncharacterized protein (Fragment) id=2440374 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
conserved membrane protein of unknown function Tax=GWC2_TM7_44_17_curated
hypothetical protein
scnpilot_p_inoc_scaffold_86_14
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(13710..15170)
DNA (1461bp) protein (487aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PNS2_9BACT rbh
Tax=BJP_IG2103_TM7_39_1400
scnpilot_p_inoc_scaffold_86_15
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(15151..16149)
DNA (999bp) protein (333aa)
Putative phosphoesterase n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PWI1_9BACT rbh
putative phosphoesterase
Putative phosphoesterase {ECO:0000313|EMBL:AGL62630.1}; TaxID=1332188 species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" source="Candidatus Saccharimonas aalborgensis.;"
scnpilot_p_inoc_scaffold_86_16
unknown

Not on your lists

comp(16231..16719)
DNA (489bp) protein (163aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_86_17
unknown

Not on your lists

16890..17540
DNA (651bp) protein (217aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_86_18
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(17654..18271)
DNA (618bp) protein (206aa)
Recombination protein RecR n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PZE5_9BACT rbh
recR; DNA repair and recombination protein
Tax=BJP_IG2103_TM7_39_1400
scnpilot_p_inoc_scaffold_86_19
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(18290..18580)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PXZ0_9BACT
hypothetical protein
Tax=BJP_IG2103_TM7_39_1400
scnpilot_p_inoc_scaffold_86_20
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(18630..20060)
DNA (1431bp) protein (477aa)
conserved membrane protein of unknown function Tax=CG_TM7_01
Putative uncharacterized protein id=2440390 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
conserved membrane protein of unknown function
scnpilot_p_inoc_scaffold_86_21
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(20085..21458)
DNA (1374bp) protein (458aa)
Replicative DNA helicase id=2440393 bin=GWC2_TM7_44_17 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
Replicative DNA helicase
Tax=BJP_IG2103_TM7_39_1400
scnpilot_p_inoc_scaffold_86_22
BJP_IG2103_TM7_39_1400, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(21498..22958)
DNA (1461bp) protein (487aa)
putative DNA polymerase III, gamma/tau subunits id=2440396 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version rbh
DNA polymerase III, subunit gamma and tau
Tax=BJP_IG2103_TM7_39_1400
scnpilot_p_inoc_scaffold_86_23
unknown

Not on your lists

comp(23160..23690)
DNA (531bp) protein (177aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_86_24
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(23778..24296)
DNA (519bp) protein (173aa)
50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 id=5226628 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7 rbh
50S ribosomal protein L7/L12 {ECO:0000313|EMBL:AHB42564.1}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
scnpilot_p_inoc_scaffold_86_25
unknown

Not on your lists

comp(24387..24602)
DNA (216bp) protein (72aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_86_26
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24609..25340)
DNA (732bp) protein (244aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN46107.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae
Putative uncharacterized protein id=2750864 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
membrane protein
scnpilot_p_inoc_scaffold_86_27
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

25447..26184
DNA (738bp) protein (246aa)
UPF0246 protein Strop_2927 id=3934426 bin=GWC2_TM7_48_9 species=Salinispora tropica genus=Salinispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW03147.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
hypothetical protein
scnpilot_p_inoc_scaffold_86_28
unknown

Not on your lists

comp(26281..26790)
DNA (510bp) protein (170aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_86_29
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(26963..27337)
DNA (375bp) protein (125aa)
rplL; ribosomal protein L12 (BL9) Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
50S ribosomal protein L7/L12 id=2440402 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
50S ribosomal protein L7/L12
scnpilot_p_inoc_scaffold_86_30
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(27409..27933)
DNA (525bp) protein (175aa)
50S ribosomal protein L10 id=2440404 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rplJ; 50S ribosomal protein L10 Tax=GWC2_TM7_44_17_curated
50S ribosomal protein L10
Displaying items 1-30 of 321 in total

View Taxonomy