Alias: ACD11_4244.102628.29
name | lists | location/seqs | annotations | notes |
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ACD11_9_91
uncultured bacterium, Bacteria
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Not on your lists |
87783..88268
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seg (db=Seg db_id=seg from=108 to=121)
seg (db=Seg db_id=seg from=67 to=83)
transmembrane_regions (db=TMHMM db_id=tmhmm from=137 to=159)
transmembrane_regions (db=TMHMM db_id=tmhmm from=95 to=117)
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ACD11_9_92
uncultured bacterium, Bacteria
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Not on your lists |
88479..88736
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endonuclease
Excinuclease ABC, C subunit (Fragment) n=2 Tax=Sphingobacterium spiritivorum RepID=C2FRP5_9SPHI (db=UNIREF evalue=1.0e-11 bit_score=72.0 identity=48.1 coverage=86.046511627907)
GIY-YIG (db=HMMPfam db_id=PF01541 from=3 to=72 evalue=3.5e-15 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
GIY-YIG endonuclease (db=superfamily db_id=SSF82771 from=1 to=77 evalue=1.9e-09 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
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ACD11_9_93
uncultured bacterium, Bacteria
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Not on your lists |
89540..90598
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hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=131 to=145)
Oligoxyloglucan reducing end-specific cellobiohydrolase (db=superfamily db_id=SSF110296 from=138 to=351 evalue=1.2e-31)
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ACD11_9_94
uncultured bacterium, Bacteria
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Not on your lists |
90632..91189
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ribosome recycling factor
coiled-coil (db=Coil db_id=coil from=157 to=185 evalue=NA)
frr: ribosome recycling factor (db=HMMTigr db_id=TIGR00496 from=10 to=185 evalue=9.5e-75 interpro_id=IPR002661 interpro_description=Ribosome recycling factor GO=Biological Process: translation (GO:0006412))
RIBOSOME RECYCLING FACTOR (RIBOSOME RELEASING FACTOR) (RRF) (db=HMMPanther db_id=PTHR20982:SF3 from=1 to=185 evalue=3.5e-74 interpro_id=IPR015998 interpro_description=Ribosome recycling factor, bacterial-like GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: translational termination (GO:0006415))
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ACD11_9_95
uncultured bacterium, Bacteria
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Not on your lists |
91206..92339
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membrane-associated zinc metalloprotease
Membrane-associated zinc metalloprotease n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIV1_9FIRM (db=UNIREF evalue=4.0e-36 bit_score=155.0 identity=35.03 coverage=84.1269841269841)
seg (db=Seg db_id=seg from=302 to=313)
seg (db=Seg db_id=seg from=35 to=46)
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ACD11_9_96
uncultured bacterium, Bacteria
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Not on your lists |
92445..92906
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greA; transcription elongation factor GreA
seg (db=Seg db_id=seg from=85 to=99)
coiled-coil (db=Coil db_id=coil from=14 to=35 evalue=NA)
GREAB_1 (db=PatternScan db_id=PS00829 from=16 to=47 evalue=0.0 interpro_id=IPR018151 interpro_description=Transcription elongation factor, GreA/GreB, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
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ACD11_9_97
uncultured bacterium, Bacteria
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Not on your lists |
93064..94554
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lysyl-tRNA synthetase
lysyl-tRNA synthetase
UPI0001D5AC77 related cluster n=1 Tax=unknown RepID=UPI0001D5AC77 (db=UNIREF evalue=1.0e-101 bit_score=374.0 identity=40.85 coverage=95.9758551307847)
seg (db=Seg db_id=seg from=466 to=477)
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ACD11_9_98
uncultured bacterium, Bacteria
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Not on your lists |
94576..94986
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FAD synthetase
seg (db=Seg db_id=seg from=111 to=124)
no description (db=Gene3D db_id=G3DSA:3.40.50.620 from=1 to=126 evalue=1.5e-23 interpro_id=IPR014729 interpro_description=Rossmann-like alpha/beta/alpha sandwich fold)
Nucleotidylyl transferase (db=superfamily db_id=SSF52374 from=1 to=136 evalue=2.1e-22)
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ACD11_9_99
uncultured bacterium, Bacteria
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Not on your lists |
comp(94940..96181)
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94940..96181 - (rbs_motif=AAA rbs_spacer=3bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE15699.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD11_9_100
uncultured bacterium, Bacteria
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Not on your lists |
96371..97699
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seryl-tRNA synthetase
seryl-tRNA synthetase
Seryl-tRNA synthetase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7E0_PAESJ (db=UNIREF evalue=4.0e-94 bit_score=348.0 identity=42.12 coverage=95.7110609480813)
coiled-coil (db=Coil db_id=coil from=44 to=65 evalue=NA)
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ACD11_9_101
uncultured bacterium, Bacteria
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Not on your lists |
97825..98229
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phage antirepressor protein
Uncharacterized protein {ECO:0000313|EMBL:EKE15701.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein alias=ACD11_C00009G00101,ACD11_4244.102628.29G0101,ACD11_4244.102628.29_101 id=3012 tax=ACD11 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=OD1-i organism_desc=OD1-i
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ACD11_9_102
uncultured bacterium, Bacteria
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Not on your lists |
98309..98869
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ACD11_9_103
uncultured bacterium, Bacteria
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Not on your lists |
comp(98870..99913)
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twitching motility protein
T2SP_E (db=PatternScan db_id=PS00662 from=198 to=212 evalue=0.0 interpro_id=IPR001482 interpro_description=Type II secretion system protein E GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: transport (GO:0006810))
pilT_fam: twitching motility protein (db=HMMTigr db_id=TIGR01420 from=2 to=343 evalue=7.6e-98 interpro_id=IPR006321 interpro_description=Pilus retraction protein PilT GO=Molecular Function: ATP binding (GO:0005524), Biological Process: transport (GO:0006810))
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=2 to=343 evalue=5.2e-60)
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ACD11_9_104
uncultured bacterium, Bacteria
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Not on your lists |
100056..101288
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beta-glucosidase
beta-glucosidase
Beta-glucosidase n=1 Tax=Pyrococcus furiosus RepID=Q9HHB3_PYRFU (db=UNIREF evalue=2.0e-81 bit_score=306.0 identity=38.75 coverage=98.5401459854015)
GLYCOSYL_HYDROL_F1_2 (db=PatternScan db_id=PS00653 from=11 to=25 evalue=0.0 interpro_id=IPR018120 interpro_description=Glycoside hydrolase, family 1, active site GO=Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553), Biological Process: carbohydrate metabolic process (GO:0005975))
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ACD11_9_105
uncultured bacterium, Bacteria
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Not on your lists |
101293..102027
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hypothetical protein
Xylose isomerase-like (db=superfamily db_id=SSF51658 from=1 to=234 evalue=2.0e-11 interpro_id=IPR013022 interpro_description=Xylose isomerase-like, TIM barrel domain)
AP_endonuc_2 (db=HMMPfam db_id=PF01261 from=27 to=178 evalue=2.4e-07 interpro_id=IPR012307 interpro_description=Xylose isomerase, TIM barrel domain)
hypothetical protein alias=ACD11_4244.102628.29G0105,ACD11_4244.102628.29_105,ACD11_C00009G00105 id=3047 tax=ACD11 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=OD1-i organism_desc=OD1-i
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