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ACD11_13

Alias: ACD11_3391.18807.27

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD11_13_1

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833..1669
DNA (837bp) protein (279aa)
phage antirepressor protein
Bro-N (db=HMMPfam db_id=PF02498 from=20 to=109 evalue=1.5e-06 interpro_id=IPR003497 interpro_description=BRO, N-terminal)
hypothetical protein alias=ACD11_C00013G00001,ACD11_3391.18807.27G0001,ACD11_3391.18807.27_1 id=3099 tax=ACD11 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:EKE15876.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD11_13_2

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1752..2885
DNA (1134bp) protein (378aa)
tRNA-guanine transglycosylase (EC:2.4.2.29)
tRNA-guanine transglycosylase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=39 Tax=Enterobacteriaceae RepID=TGT_PROMH (db=UNIREF evalue=7.0e-110 bit_score=400.0 identity=51.74 coverage=90.7407407407407)
Q_tRNA_tgt: queuine tRNA-ribosyltransfera (db=HMMTigr db_id=TIGR00430 from=1 to=377 evalue=6.7e-181 interpro_id=IPR004803 interpro_description=Queuine tRNA-ribosyltransferase GO=Biological Process: tRNA processing (GO:0008033), Molecular Function: queuine tRNA-ribosyltransferase activity (GO:0008479), Biological Process: queuosine biosynthetic process (GO:0008616))
ACD11_13_3

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2979..4289
DNA (1311bp) protein (437aa)
ABC transporter
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=147 to=161 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF32 from=6 to=232 evalue=3.5e-86)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=6 to=232 evalue=3.5e-86)
ACD11_13_4

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4300..5505
DNA (1206bp) protein (402aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
transmembrane_regions (db=TMHMM db_id=tmhmm from=362 to=384)
transmembrane_regions (db=TMHMM db_id=tmhmm from=313 to=335)
ACD11_13_5

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5581..6405
DNA (825bp) protein (275aa)
folD; methylenetetrahydrofolate dehydrogenase (EC:1.5.1.5)
THF_DHG_CYH_1 (db=PatternScan db_id=PS00766 from=70 to=95 evalue=0.0 interpro_id=IPR020867 interpro_description=Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: folic acid and derivative biosynthetic process (GO:0009396))
METHYLENETETRAHYDROFOLATE DEHYDROGENASE FAMILY MEMBER (db=HMMPanther db_id=PTHR10025 from=11 to=270 evalue=4.7e-63)
FORMATE-TETRAHYDROFOLATE LIGASE (db=HMMPanther db_id=PTHR10025:SF4 from=11 to=270 evalue=4.7e-63)
ACD11_13_6

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6402..8801
DNA (2400bp) protein (800aa)
leuS; Leucine-tRNA ligase (EC:6.1.1.4)
leuS; Leucine-tRNA ligase (EC:6.1.1.4)
Leucyl-tRNA synthetase n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B4K7_9BACI (db=UNIREF evalue=0.0 bit_score=776.0 identity=51.16 coverage=95.5)
seg (db=Seg db_id=seg from=24 to=34)
ACD11_13_7

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comp(8972..9169)
DNA (198bp) protein (66aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=56)
Uncharacterized protein {ECO:0000313|EMBL:EKE15882.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD11_13_8

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comp(9163..9306)
DNA (144bp) protein (48aa)
9163..9306 - (rbs_motif=TAAA rbs_spacer=9bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE15883.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD11_13_9

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9393..10421
DNA (1029bp) protein (343aa)
hypothetical protein
hypothetical protein cdiviTM7_01307 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B21F9 (db=UNIREF evalue=3.0e-69 bit_score=265.0 identity=44.52 coverage=88.0466472303207)
seg (db=Seg db_id=seg from=10 to=22)
CofD_related: conserved hypothetical pro (db=HMMTigr db_id=TIGR01826 from=6 to=330 evalue=5.3e-108 interpro_id=IPR010119 interpro_description=Uncharacterised protein family UPF0052)
ACD11_13_10

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10443..10970
DNA (528bp) protein (176aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=152 to=174)
seg (db=Seg db_id=seg from=107 to=120)
transmembrane_regions (db=TMHMM db_id=tmhmm from=120 to=142)
transmembrane_regions (db=TMHMM db_id=tmhmm from=52 to=74)
ACD11_13_11

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10986..12026
DNA (1041bp) protein (347aa)
YloN n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DSV2_9BACT (db=UNIREF evalue=1.0e-84 bit_score=316.0 identity=45.98 coverage=98.5590778097983)
radical SAM enzyme, Cfr family
coiled-coil (db=Coil db_id=coil from=235 to=256 evalue=NA)
ACD11_13_12

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12031..13890
DNA (1860bp) protein (620aa)
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C9F9_9GAMM (db=UNIREF evalue=0.0 bit_score=741.0 identity=57.26 coverage=99.5161290322581)
seg (db=Seg db_id=seg from=307 to=318)
ACD11_13_13

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14022..14567
DNA (546bp) protein (182aa)
14022..14567 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE15888.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD11_13_14

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16281..16982
DNA (702bp) protein (234aa)
SAM-dependent methyltransferase
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=233 evalue=3.1e-35)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=17 to=217 evalue=3.2e-25)
Methyltransf_11 (db=HMMPfam db_id=PF08241 from=49 to=148 evalue=1.4e-17 interpro_id=IPR013216 interpro_description=Methyltransferase type 11 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
ACD11_13_15

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16991..17809
DNA (819bp) protein (273aa)
uppP; undecaprenyl-diphosphatase UppP (EC:3.6.1.27)
seg (db=Seg db_id=seg from=174 to=185)
transmembrane_regions (db=TMHMM db_id=tmhmm from=46 to=68)
transmembrane_regions (db=TMHMM db_id=tmhmm from=89 to=111)
ACD11_13_16

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17822..18736
DNA (915bp) protein (305aa)
thioredoxin reductase
seg (db=Seg db_id=seg from=25 to=37)
PNDRDTASEII (db=FPrintScan db_id=PR00469 from=56 to=66 evalue=1.6e-53 interpro_id=IPR000103 interpro_description=Pyridine nucleotide-disulphide oxidoreductase, class-II GO=Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation reduction (GO:0055114))
PNDRDTASEII (db=FPrintScan db_id=PR00469 from=36 to=51 evalue=1.6e-53 interpro_id=IPR000103 interpro_description=Pyridine nucleotide-disulphide oxidoreductase, class-II GO=Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation reduction (GO:0055114))
Displaying 16 items

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