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ACD11_9_78

Organism: ACD11

near complete RP 50 / 55 MC: 11 BSCG 47 / 51 MC: 2 ASCG 0 / 38
Location: 78921..79553

Top 3 Functional Annotations

Value Algorithm Source
rpsD; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 213.0
  • Bit_score: 231
  • Evalue 2.00e-58
rpsD_bact: ribosomal protein S4 (db=HMMTigr db_id=TIGR01017 from=3 to=210 evalue=2.8e-72 interpro_id=IPR005709 interpro_description=Ribosomal protein S4, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.80e-72
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=2 to=210 evalue=3.3e-60) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.30e-60

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 633
ATGGCACGAGATTTGGAATCAAAATGTAAAAAATGCAGAAGAGCCGGAGAAAAGCTTTTTCTTAAAGGTGATCGTTGTGGTTCTCCAAAATGCGCTGTTGTGAGAAGGTCATATGCTCCCGGAATGCACGGAAAAAACATATCCAGAGGGCTTAGCGAATTTGGAAAACAACTGGCAATGAAGCAAAGAATAAAGAGATTATATGGAGTATTGGAAAGACAATTTAGAAGACACTTTGAAGAAGCAAAGGCTAAAGAAGGAGTTACTGGGGATATGTTGTTGACTAGATTGGAATTAAGATTGGACAATGTTGTGAAAAGAATCGGATTTGCAATTGCTCCGTCTCAGGCAAGACAACTTGTCAACCATGGACATTTTTTAGTTAATGGAAAAAAAGTTGACATTCCTTCCTGCGAAGTGAAAGTAGGGGATGTTATCAGCATTAATTCAACAAAAAAAGAAAATGCTTTTTTTGTAAGTCAAGCGCAAATTTTAAAAAATAAAAAAGACTTTCCATCATGGATTCAGTTTGATTCAGCAAAAAATGAAGCCAAAGTAGTTTCATTGCCATCAAGAGATGAAATTGGTGTTCACGTTGATCCGCAGATGGTGGTTGAATATTTTTCTCGTTAG
PROTEIN sequence
Length: 211
MARDLESKCKKCRRAGEKLFLKGDRCGSPKCAVVRRSYAPGMHGKNISRGLSEFGKQLAMKQRIKRLYGVLERQFRRHFEEAKAKEGVTGDMLLTRLELRLDNVVKRIGFAIAPSQARQLVNHGHFLVNGKKVDIPSCEVKVGDVISINSTKKENAFFVSQAQILKNKKDFPSWIQFDSAKNEAKVVSLPSRDEIGVHVDPQMVVEYFSR*