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ACD28_13

Alias: ACD28_23400.20359.11

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD28_13_1

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comp(2..889)
DNA (888bp) protein (296aa)
Chorismate synthase n=1 Tax=Capnocytophaga gingivalis ATCC 33624 RepID=C2M5N5_CAPGI (db=UNIREF evalue=2.0e-90 bit_score=335.0 identity=54.69 coverage=98.6486486486486)
aroC; chorismate synthase (EC:4.2.3.5)
aroC; chorismate synthase (EC:4.2.3.5)
CHORISMATE_SYNTHASE_2 (db=PatternScan db_id=PS00788 from=124 to=140 evalue=0.0 interpro_id=IPR020541 interpro_description=Chorismate synthase, conserved site GO=Molecular Function: chorismate synthase activity (GO:0004107), Biological Process: aromatic amino acid family biosynthetic process (GO:0009073))
ACD28_13_2

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comp(953..1345)
DNA (393bp) protein (131aa)
50S ribosomal protein L31
50S ribosomal protein L31 n=1 Tax=uncultured marine bacterium 311 RepID=Q6SHU3_9BACT (db=UNIREF evalue=8.0e-17 bit_score=89.4 identity=48.51 coverage=71.7557251908397)
seg (db=Seg db_id=seg from=117 to=130)
seg (db=Seg db_id=seg from=102 to=113)
ACD28_13_3
GWA2_PER_44_7, Peregrinibacteria, Bacteria

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comp(1369..2688)
DNA (1320bp) protein (440aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=138 to=159)
seg (db=Seg db_id=seg from=175 to=198)
transmembrane_regions (db=TMHMM db_id=tmhmm from=397 to=416)
ACD28_13_4
GWA2_PER_44_7, Peregrinibacteria, Bacteria

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comp(2713..5340)
DNA (2628bp) protein (876aa)
DNA gyrase subunit A
DNA gyrase subunit A
DNA gyrase, A subunit n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KYU8_THERP (db=UNIREF evalue=0.0 bit_score=904.0 identity=56.38 coverage=90.7534246575342)
seg (db=Seg db_id=seg from=330 to=344)
ACD28_13_5

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5491..6651
DNA (1161bp) protein (387aa)
diguanylate cyclase
Nucleotide cyclase (db=superfamily db_id=SSF55073 from=170 to=297 evalue=3.1e-24 interpro_id=IPR001054 interpro_description=Adenylyl cyclase class-3/4/guanylyl cyclase GO=Biological Process: cyclic nucleotide biosynthetic process (GO:0009190), Molecular Function: phosphorus-oxygen lyase activity (GO:0016849), Biological Process: intracellular signaling pathway (GO:0023034))
GGDEF (db=HMMPfam db_id=PF00990 from=176 to=267 evalue=2.0e-20 interpro_id=IPR000160 interpro_description=Diguanylate cyclase, predicted)
no description (db=Gene3D db_id=G3DSA:3.30.70.270 from=170 to=339 evalue=6.8e-18)
ACD28_13_6
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

6830..8950
DNA (2121bp) protein (707aa)
Type IV secretory pathway VirB4 protein-like protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B267B (db=UNIREF evalue=0.0 bit_score=641.0 identity=53.36 coverage=80.6223479490806)
Type IV secretory pathway VirB4 components-like protein
Type IV secretory pathway VirB4 components-like protein
seg (db=Seg db_id=seg from=24 to=36)
ACD28_13_7
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

8969..9208
DNA (240bp) protein (80aa)
8969..9208 + (rbs_motif=TAA rbs_spacer=11bp)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_13_8
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

9243..9800
DNA (558bp) protein (186aa)
seg (db=Seg db_id=seg from=59 to=68)
seg (db=Seg db_id=seg from=149 to=183)
Uncharacterized protein {ECO:0000313|EMBL:KKT73339.1}; Flags: Fragment;; TaxID=1619057 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_44_7.;"
hypothetical protein
ACD28_13_9

Not on your lists

comp(9771..11540)
DNA (1770bp) protein (590aa)
ctpA; carboxy-terminal-processing protease (EC:3.4.21.102)
seg (db=Seg db_id=seg from=219 to=228)
seg (db=Seg db_id=seg from=4 to=26)
prc: C-terminal processing peptidase (db=HMMTigr db_id=TIGR00225 from=250 to=583 evalue=1.3e-66 interpro_id=IPR004447 interpro_description=Peptidase S41A, C-terminal peptidase GO=Biological Process: proteolysis (GO:0006508), Molecular Function: serine-type peptidase activity (GO:0008236))
ACD28_13_10

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11598..14078
DNA (2481bp) protein (827aa)
seg (db=Seg db_id=seg from=711 to=747)
seg (db=Seg db_id=seg from=321 to=339)
seg (db=Seg db_id=seg from=267 to=278)
seg (db=Seg db_id=seg from=18 to=34)
ACD28_13_11

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comp(14398..14967)
DNA (570bp) protein (190aa)
14398..14967 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD93486.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_13_12

Not on your lists

comp(15007..15246)
DNA (240bp) protein (80aa)
15007..15246 - (rbs_motif=TAA rbs_spacer=9bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD93487.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_13_13

Not on your lists


15428..17347
DNA (1920bp) protein (640aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=2 Tax=Bacillus megaterium RepID=D5D921_BACMD (db=UNIREF evalue=0.0 bit_score=724.0 identity=60.84 coverage=99.53125)
coiled-coil (db=Coil db_id=coil from=298 to=319 evalue=NA)
ACD28_13_14

Not on your lists

17447..18676
DNA (1230bp) protein (410aa)
seg (db=Seg db_id=seg from=72 to=84)
Uncharacterized protein {ECO:0000313|EMBL:EKD93489.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_13_15

Not on your lists

18765..20393
DNA (1629bp) protein (543aa)
FAD/NAD(P)-binding domain (db=superfamily db_id=SSF51905 from=119 to=316 evalue=5.7e-12)
RNGMNOXGNASE (db=FPrintScan db_id=PR00420 from=468 to=483 evalue=5.5e-05)
RNGMNOXGNASE (db=FPrintScan db_id=PR00420 from=121 to=143 evalue=5.5e-05)
DIMETHYLANILINE MONOOXYGENASE (db=HMMPanther db_id=PTHR23023 from=122 to=316 evalue=0.00014)
Displaying 15 items

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