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ACD28

Rifle_ACD_GWA2_PER_44_7_44_1
In projects: Rifle_ACD  |  all_cpr_genomes  |  ggK_CPR

Consensus taxonomy: GWA2_PER_44_7  →  Peregrinibacteria  →  Bacteria

Taxonomy override: Peregrinibacteria

Metagenomic Context

Properties

Avg. coverage: 1.00 Longest contig: 84.31 Kbp Bin length: 1.68 Mbp GC content: 44.42 %
Contigs count: 207 Features count: 1709 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 49 / 55 MC: 12 BSCG 45 / 51 MC: 2 ASCG 0 / 38

Description

PER

Displaying items 1-50 of 207 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
ACD28_25 ACD28_20444.84273.13
Species: GWA2_PER_44_7 (72.73%)
77 84311 bp 42.69 1.00 88.92
done Jill Banfield (11/15/12)
ACD28_58 ACD28_51877.57689.12
Species: GWA2_PER_44_7 (60.42%)
48 57727 bp 43.73 1.00 92.94
done Jill Banfield (11/15/12)
ACD28_82 ACD28_15860.30121.12
Species: GWA2_PER_44_7 (70%)
40 30159 bp 43.94 1.00 89.75
done: ribosomal, RNA poly, several identified in ACD Jill Banfield (11/15/12)
ACD28_86 ACD28_10157.34453.12
Species: GWA2_PER_44_7 (63.89%)
36 34491 bp 44.51 1.00 90.65
done Jill Banfield (11/15/12)
ACD28_75 ACD28_23867.43285.12
Species: GWA2_PER_44_7 (62.86%)
35 43323 bp 42.80 1.00 91.19
done Jill Banfield (11/15/12)
ACD28_4 ACD28_25380.34003.12
Species: GWA2_PER_44_7 (68.75%)
32 34041 bp 43.50 1.00 91.68
done Jill Banfield (11/15/12)
ACD28_55 ACD28_23965.29365.11
Species: GWA2_PER_44_7 (68.97%)
29 29403 bp 43.63 1.00 91.43
done Jill Banfield (11/15/12)
ACD28_96 ACD28_8886.34287.12
Species: GWA2_PER_44_7 (62.07%)
29 34325 bp 43.44 1.00 92.91
done, inc. glycol protein proteomics Jill Banfield (11/15/12)
ACD28_95 ACD28_13376.27830.12
Species: GWA2_PER_44_7 (66.67%)
27 27868 bp 44.01 1.00 93.48
done Jill Banfield (11/15/12)
ACD28_102 ACD28_22942.28216.11
Species: GWA2_PER_44_7 (66.67%)
27 28254 bp 42.95 1.00 80.41
done Jill Banfield (11/15/12)
ACD28_18 ACD28_5387.25013.12
Species: GWA2_PER_44_7 (80.77%)
26 25051 bp 42.65 1.00 92.69
done Jill Banfield (11/15/12)
ACD28_44 ACD28_13288.19020.11
Species: GWA2_PER_44_7 (76%)
25 19058 bp 43.11 1.00 86.01
done Jill Banfield (11/15/12)
ACD28_59 ACD28_16820.25165.12
Species: GWA2_PER_44_7 (80%)
25 25203 bp 42.71 1.00 85.10
done Jill Banfield (11/15/12)
ACD28_72 ACD28_38979.22483.12
Species: GWA2_PER_44_7 (82.61%)
23 22521 bp 43.85 1.00 93.45
done Jill Banfield (11/15/12)
ACD28_21 ACD28_31467.26726.12
Species: GWA2_PER_44_7 (72.73%)
22 26764 bp 43.98 1.00 95.71
done Jill Banfield (11/15/12)
ACD28_17 ACD28_49156.19664.11
Species: uncultured bacterium (66.67%)
21 19702 bp 44.74 1.00 89.15
done Jill Banfield (11/15/12)
ACD28_33 ACD28_10498.16745.12
Species: GWA2_PER_44_7 (61.9%)
21 16783 bp 43.25 1.00 90.23
done Jill Banfield (11/15/12)
ACD28_38 ACD28_74774.14484.11
Species: GWA2_PER_44_7 (61.9%)
21 14522 bp 43.89 1.00 87.20
done Jill Banfield (11/15/12)
ACD28_26 ACD28_29057.20650.12
Species: uncultured bacterium (52.63%)
19 20688 bp 41.64 1.00 90.36
done Jill Banfield (11/15/12)
ACD28_31 ACD28_1013.15855.10
Species: GWA2_PER_44_7 (68.42%)
19 15893 bp 46.05 1.00 85.40
done Jill Banfield (11/15/12)
ACD28_69 ACD28_45336.15019.11
Species: GWA2_PER_44_7 (57.89%)
19 15057 bp 45.67 1.00 92.07
done Jill Banfield (11/15/12)
ACD28_119 ACD28_81339.18229.12
Species: GWA2_PER_44_7 (52.63%)
19 18267 bp 43.35 1.00 86.55
done Jill Banfield (11/15/12)
ACD28_91 ACD28_71342.11769.11
Species: uncultured bacterium (94.44%)
18 11807 bp 42.93 1.00 84.92
done Jill Banfield (11/15/12)
ACD28_13 ACD28_23400.20359.11
Species: uncultured bacterium (66.67%)
15 20397 bp 44.97 1.00 93.88
done Jill Banfield (11/15/12)
ACD28_90 ACD28_110241.18636.11
Species: GWA2_PER_44_7 (60%)
15 18674 bp 43.60 1.00 77.21
done Jill Banfield (11/15/12)
ACD28_114 ACD28_23627.18011.12
Species: GWA2_PER_44_7 (80%)
15 18049 bp 43.55 1.00 86.58
done Jill Banfield (11/15/12)
ACD28_14 ACD28_30948.13908.11
Species: uncultured bacterium (92.86%)
14 13946 bp 45.70 1.00 79.08
done Jill Banfield (11/15/12)
ACD28_19 ACD28_19528.11636.9
Species: uncultured bacterium (64.29%)
14 11674 bp 46.04 1.00 72.80
done Jill Banfield (11/15/12)
ACD28_56 ACD28_29900.10108.9
Species: uncultured bacterium (100%)
14 10146 bp 36.52 1.00 49.11
done: RMS + resolvase Jill Banfield (11/15/12)
ACD28_2 ACD28_43157.13942.11
Species: GWA2_PER_44_7 (76.92%)
13 13980 bp 44.56 1.00 86.97
done Jill Banfield (11/15/12)
ACD28_10 ACD28_32068.11786.11
Species: GWA2_PER_44_7 (61.54%)
13 11824 bp 44.38 1.00 80.07
done Jill Banfield (11/15/12)
ACD28_35 ACD28_2888.13756.14
Species: GWA2_PER_44_7 (69.23%)
13 13794 bp 40.14 1.00 85.86
done Jill Banfield (11/15/12)
ACD28_115 ACD28_23779.12905.11
Species: GWA2_PER_44_7 (53.85%)
13 12943 bp 46.16 1.00 88.24
done Jill Banfield (11/15/12)
ACD28_157 ACD28_57125.14619.10
Species: GWA2_PER_44_7 (53.85%)
13 14657 bp 44.56 1.00 90.49
done Jill Banfield (11/15/12)
ACD28_37 ACD28_3549.9471.12
Species: GWA2_PER_44_7 (75%)
12 9509 bp 43.60 1.00 92.75
done Jill Banfield (11/15/12)
ACD28_73 ACD28_72956.15467.11
Species: GWA2_OD1_47_10 (50%)
12 15505 bp 44.21 1.00 88.75
done Jill Banfield (11/15/12)
ACD28_77 ACD28_34360.13147.11
Species: GWA2_PER_44_7 (66.67%)
12 13185 bp 45.30 1.00 78.59
done Jill Banfield (11/15/12)
ACD28_87 ACD28_48184.8010.9
Species: uncultured bacterium (66.67%)
12 8048 bp 46.36 1.00 70.42
done Jill Banfield (11/15/12)
ACD28_122 ACD28_59987.8557.11
Species: uncultured bacterium (66.67%)
12 8595 bp 46.06 1.00 95.15
done Jill Banfield (11/15/12)
ACD28_133 ACD28_71134.9795.11
Species: GWA2_PER_44_7 (91.67%)
12 9833 bp 44.65 1.00 81.31
done Jill Banfield (11/15/12)
ACD28_112 ACD28_28640.6526.10
Species: uncultured bacterium (63.64%)
11 6564 bp 46.62 1.00 85.92
done Jill Banfield (11/15/12)
ACD28_156 ACD28_42.16063.12
Species: GWA2_PER_44_7 (54.55%)
11 16101 bp 44.44 1.00 94.19
done Jill Banfield (11/15/12)
ACD28_160 ACD28_27668.7961.10
Species: GWA2_PER_44_7 (72.73%)
11 7999 bp 45.07 1.00 80.26
done Jill Banfield (11/15/12)
ACD28_3 ACD28_1027.11124.12
Species: GWA2_PER_44_7 (60%)
10 11162 bp 43.19 1.00 94.10
done Jill Banfield (11/15/12)
ACD28_50 ACD28_1110.11284.14
Species: GWA2_PER_44_7 (80%)
10 11322 bp 39.73 1.00 90.43
done Jill Banfield (11/15/12)
ACD28_52 ACD28_36698.11338.12
Species: GWA2_PER_44_7 (100%)
10 11376 bp 42.71 1.00 69.01
done Jill Banfield (11/15/12)
ACD28_61 ACD28_24404.6595.11
Species: GWA2_PER_44_7 (60%)
10 6633 bp 43.99 1.00 80.69
done Jill Banfield (11/15/12)
ACD28_68 ACD28_37149.9140.11
Species: GWA2_PER_44_7 (70%)
10 9178 bp 44.02 1.00 89.89
done Jill Banfield (11/15/12)
ACD28_93 ACD28_73008.8524.9
Species: GWA2_PER_44_7 (60%)
10 8562 bp 47.21 1.00 93.27
done Jill Banfield (11/15/12)
ACD28_101 ACD28_20190.11513.11
Species: GWA2_PER_44_7 (70%)
10 11551 bp 44.34 1.00 90.75
done Jill Banfield (11/15/12)
Displaying items 1-50 of 207 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.