ggKbase home page

ACD28_68

Alias: ACD28_37149.9140.11

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD28_68_1

Not on your lists

3..1733
DNA (1731bp) protein (577aa)
ileS; isoleucyl-tRNA synthetase
ileS; isoleucyl-tRNA synthetase
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R6V7_9CHLA (db=UNIREF evalue=6.0e-140 bit_score=501.0 identity=47.22 coverage=98.9601386481802)
seg (db=Seg db_id=seg from=445 to=458)
ACD28_68_2
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

1780..2160
DNA (381bp) protein (127aa)
seg (db=Seg db_id=seg from=63 to=74)
transmembrane_regions (db=TMHMM db_id=tmhmm from=100 to=122)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=25)
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=51)
ACD28_68_3
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

2190..2408
DNA (219bp) protein (73aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=71)
seg (db=Seg db_id=seg from=7 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
SecG (db=HMMPfam db_id=PF03840 from=5 to=71 evalue=7.7e-11 interpro_id=IPR004692 interpro_description=Preprotein translocase SecG subunit GO=Biological Process: protein secretion (GO:0009306), Molecular Function: P-P-bond-hydrolysis-driven protein transmembrane transporter activity (GO:0015450), Cellular Component: integral to membrane (GO:0016021))
ACD28_68_4

Not on your lists

comp(2306..2593)
DNA (288bp) protein (96aa)
2306..2593 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD93124.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_68_5
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

3242..4153
DNA (912bp) protein (304aa)
putative Extracellular solute-binding protein family 5
seg (db=Seg db_id=seg from=242 to=255)
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=13 to=299 evalue=4.4e-27)
SBP_bac_5 (db=HMMPfam db_id=PF00496 from=13 to=210 evalue=2.6e-19 interpro_id=IPR000914 interpro_description=Bacterial extracellular solute-binding protein, family 5 GO=Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810))
ACD28_68_6
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists


4191..4637
DNA (447bp) protein (149aa)
rplI_2; ribosomal protein L9
seg (db=Seg db_id=seg from=95 to=115)
coiled-coil (db=Coil db_id=coil from=44 to=72 evalue=NA)
RIBOSOMAL_L9 (db=PatternScan db_id=PS00651 from=13 to=40 evalue=0.0 interpro_id=IPR020070 interpro_description=Ribosomal protein L9, N-terminal)
ACD28_68_7
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

4755..5135
DNA (381bp) protein (127aa)
Holliday junction resolvase YqgF
seg (db=Seg db_id=seg from=51 to=60)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=1 to=126 evalue=2.1e-29 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
UPF0081 (db=HMMPfam db_id=PF03652 from=4 to=123 evalue=1.2e-27 interpro_id=IPR005227 interpro_description=Resolvase, holliday junction-type, YqgF-like GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310), Biological Process: response to DNA damage stimulus (GO:0006974), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788))
ACD28_68_8
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

5150..6109
DNA (960bp) protein (320aa)
seg (db=Seg db_id=seg from=252 to=261)
seg (db=Seg db_id=seg from=270 to=286)
seg (db=Seg db_id=seg from=292 to=306)
Uncharacterized protein {ECO:0000313|EMBL:KKR07999.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_17.;"
ACD28_68_9
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

6093..7838
DNA (1746bp) protein (582aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J980_9ARCH (db=UNIREF evalue=1.0e-128 bit_score=463.0 identity=53.59 coverage=71.1340206185567)
seg (db=Seg db_id=seg from=557 to=581)
ACD28_68_10
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(7993..9177)
DNA (1185bp) protein (395aa)
phosphoglycerate kinase (EC:2.7.2.3)
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CYG2_HALOH (db=UNIREF evalue=2.0e-113 bit_score=412.0 identity=50.38 coverage=97.9746835443038)
PGLYCERATE_KINASE (db=PatternScan db_id=PS00111 from=12 to=22 evalue=0.0 interpro_id=IPR015911 interpro_description=Phosphoglycerate kinase, conserved site GO=Molecular Function: phosphoglycerate kinase activity (GO:0004618), Biological Process: glycolysis (GO:0006096))
Displaying 10 items

View Taxonomy