Alias: ACD28_16820.25165.12
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD28_59_1
uncultured bacterium, Bacteria
|
Not on your lists |
3..179
|
3..179 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD93709.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
|
|
ACD28_59_2
uncultured bacterium, Bacteria
|
Not on your lists |
comp(92..418)
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=80)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=53)
transmembrane_regions (db=TMHMM db_id=tmhmm from=85 to=107)
MtN3_slv (db=HMMPfam db_id=PF03083 from=31 to=106 evalue=1.6e-06 interpro_id=IPR018169 interpro_description=MtN3/saliva-related transmembrane protein, conserved region GO=Cellular Component: membrane (GO:0016020))
|
|
ACD28_59_3
GWA2_PER_44_7, Peregrinibacteria, Bacteria
|
Not on your lists |
comp(487..3255)
|
seg (db=Seg db_id=seg from=664 to=678)
seg (db=Seg db_id=seg from=117 to=132)
hypothetical protein Tax=GWA2_PER_44_7
|
|
ACD28_59_4
GWA2_PER_44_7, Peregrinibacteria, Bacteria
|
Not on your lists |
comp(3261..3533)
|
coiled-coil (db=Coil db_id=coil from=55 to=76 evalue=NA)
seg (db=Seg db_id=seg from=3 to=15)
hypothetical protein Tax=GWA2_PER_44_7
|
|
ACD28_59_5
GWA2_PER_44_7, Peregrinibacteria, Bacteria
|
Not on your lists |
comp(3742..4074)
|
seg (db=Seg db_id=seg from=99 to=109)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=28 to=50)
hypothetical protein Tax=GWA2_PER_44_7
|
|
ACD28_59_6
GWA2_PER_44_7, Peregrinibacteria, Bacteria
|
Not on your lists |
comp(4082..4198)
|
4082..4198 - (rbs_motif=TAA rbs_spacer=4bp)
hypothetical protein Tax=GWA2_PER_44_7
|
|
ACD28_59_7
uncultured bacterium, Bacteria
|
Not on your lists |
comp(4203..5657)
|
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Halothermothrix orenii H 168 RepID=B8D126_HALOH (db=UNIREF evalue=5.0e-133 bit_score=478.0 identity=48.16 coverage=98.7628865979381)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
GATB (db=PatternScan db_id=PS01234 from=149 to=163 evalue=0.0 interpro_id=IPR017958 interpro_description=Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO=Biological Process: translation (GO:0006412), Molecular Function: carbon-nitrogen ligase activity, with glutamine as amido-N-donor (GO:0016884))
|
|
ACD28_59_8
GWA2_PER_44_7, Peregrinibacteria, Bacteria
|
Not on your lists |
comp(5754..7643)
|
hypothetical protein
BPL_N (db=HMMPfam db_id=PF09825 from=386 to=437 evalue=8.8e-11 interpro_id=IPR019197 interpro_description=Biotin-protein ligase, N-terminal)
SLH (db=HMMPfam db_id=PF00395 from=98 to=135 evalue=1.1e-08 interpro_id=IPR001119 interpro_description=S-layer homology domain)
Class I glutamine amidotransferase-like (db=superfamily db_id=SSF52317 from=328 to=464 evalue=3.2e-08)
|
|
ACD28_59_9
uncultured bacterium, Bacteria
|
Not on your lists |
comp(7653..8252)
|
dephospho-CoA kinase (EC:2.7.1.24)
seg (db=Seg db_id=seg from=10 to=23)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=5 to=193 evalue=7.0e-35)
TIGR00152: dephospho-CoA kinase (db=HMMTigr db_id=TIGR00152 from=10 to=193 evalue=3.6e-27 interpro_id=IPR001977 interpro_description=Dephospho-CoA kinase GO=Molecular Function: dephospho-CoA kinase activity (GO:0004140), Molecular Function: ATP binding (GO:0005524), Biological Process: coenzyme A biosynthetic process (GO:0015937))
|
|
ACD28_59_10
GWA2_PER_44_7, Peregrinibacteria, Bacteria
|
Not on your lists |
comp(8286..8702)
|
seg (db=Seg db_id=seg from=7 to=22)
seg (db=Seg db_id=seg from=95 to=110)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
Putative uncharacterized protein Tax=GWA2_PER_44_7
|
|
ACD28_59_11
GWA2_PER_44_7, Peregrinibacteria, Bacteria
|
Not on your lists |
comp(8705..9271)
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=58)
DUF304 (db=HMMPfam db_id=PF03703 from=93 to=139 evalue=6.6e-05 interpro_id=IPR005182 interpro_description=Protein of unknown function DUF304, transmembrane flanked domain, bacterial)
Uncharacterized protein {ECO:0000313|EMBL:KKT75840.1}; TaxID=1619057 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_44_7.;"
|
|
ACD28_59_12
GWA2_PER_44_7, Peregrinibacteria, Bacteria
|
Not on your lists |
9404..10045
|
signal peptidase I (EC:3.4.21.89)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
SPASE_I_2 (db=PatternScan db_id=PS00760 from=102 to=114 evalue=0.0 interpro_id=IPR019757 interpro_description=Peptidase S26A, signal peptidase I, lysine active site GO=Molecular Function: serine-type peptidase activity (GO:0008236), Cellular Component: integral to membrane (GO:0016021))
SPASE_I_3 (db=PatternScan db_id=PS00761 from=156 to=169 evalue=0.0 interpro_id=IPR019758 interpro_description=Peptidase S26A, signal peptidase I, conserved site GO=Molecular Function: serine-type peptidase activity (GO:0008236), Cellular Component: integral to membrane (GO:0016021))
|
|
ACD28_59_13
GWA2_PER_44_7, Peregrinibacteria, Bacteria
|
Not on your lists |
comp(10094..10528)
|
seg (db=Seg db_id=seg from=57 to=80)
seg (db=Seg db_id=seg from=94 to=120)
transmembrane_regions (db=TMHMM db_id=tmhmm from=26 to=48)
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=80)
|
|
ACD28_59_14
GWA2_PER_44_7, Peregrinibacteria, Bacteria
|
Not on your lists |
comp(10556..11383)
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=173 to=190)
transmembrane_regions (db=TMHMM db_id=tmhmm from=197 to=219)
transmembrane_regions (db=TMHMM db_id=tmhmm from=244 to=266)
|
|
ACD28_59_15
GWA2_PER_44_7, Peregrinibacteria, Bacteria
|
Not on your lists |
11432..12400
|
methionyl-tRNA formyltransferase
fmt: methionyl-tRNA formyltransferase (db=HMMTigr db_id=TIGR00460 from=20 to=320 evalue=9.1e-69 interpro_id=IPR005794 interpro_description=Methionyl-tRNA formyltransferase GO=Molecular Function: methionyl-tRNA formyltransferase activity (GO:0004479), Biological Process: translation (GO:0006412))
Formyltransferase (db=superfamily db_id=SSF53328 from=20 to=218 evalue=3.1e-51 interpro_id=IPR002376 interpro_description=Formyl transferase, N-terminal GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: hydroxymethyl-, formyl- and related transferase activity (GO:0016742))
no description (db=Gene3D db_id=G3DSA:3.40.50.170 from=20 to=217 evalue=1.2e-48 interpro_id=IPR002376 interpro_description=Formyl transferase, N-terminal GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: hydroxymethyl-, formyl- and related transferase activity (GO:0016742))
|
|
ACD28_59_16
GWA2_PER_44_7, Peregrinibacteria, Bacteria
|
Not on your lists |
comp(12417..13610)
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=184 to=203)
transmembrane_regions (db=TMHMM db_id=tmhmm from=224 to=246)
transmembrane_regions (db=TMHMM db_id=tmhmm from=251 to=273)
transmembrane_regions (db=TMHMM db_id=tmhmm from=328 to=350)
|
|
ACD28_59_17
GWA2_PER_44_7, Peregrinibacteria, Bacteria
|
Not on your lists |
comp(13622..15073)
|
hypothetical protein
seg (db=Seg db_id=seg from=32 to=40)
seg (db=Seg db_id=seg from=10 to=21)
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=25 to=465 evalue=7.1e-46)
|
|
ACD28_59_18
GWA2_PER_44_7, Peregrinibacteria, Bacteria
|
Not on your lists |
comp(15087..16010)
|
glycosyl transferase family protein
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=296 evalue=2.6e-43)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=1 to=225 evalue=4.4e-35)
|
|
ACD28_59_19
GWA2_PER_44_7, Peregrinibacteria, Bacteria
|
Not on your lists |
16135..17433
|
Putative uncharacterized protein n=1 Tax=bacterium Ellin514 RepID=B9X9N3_9BACT (db=UNIREF evalue=6.0e-29 bit_score=132.0 identity=26.49 coverage=90.0692840646651)
hypothetical protein (db=KEGG evalue=3.0e-25 bit_score=120.0 identity=25.0 coverage=89.1454965357968)
Uncharacterized protein Tax=GWA2_PER_44_7
|
|
ACD28_59_20
GWA2_PER_44_7, Peregrinibacteria, Bacteria
|
Not on your lists |
comp(17427..17810)
|
ssb; ssDNA-binding protein
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=2 to=127 evalue=1.5e-41 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
SSB (db=HMMPfam db_id=PF00436 from=4 to=107 evalue=8.3e-35 interpro_id=IPR000424 interpro_description=Primosome PriB/single-strand DNA-binding GO=Molecular Function: single-stranded DNA binding (GO:0003697))
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=2 to=117 evalue=1.5e-34 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold)
|
|
ACD28_59_21
uncultured bacterium, Bacteria
|
Not on your lists |
17954..18535
|
Riboflavin synthase alpha chain
Riboflavin synthase, alpha subunit (db=HMMPIR db_id=PIRSF000498 from=1 to=192 evalue=1.0e-83 interpro_id=IPR001783 interpro_description=Lumazine-binding protein)
RIBOFLAVIN SYNTHASE ALPHA CHAIN (db=HMMPanther db_id=PTHR21098 from=1 to=192 evalue=5.3e-68 interpro_id=IPR001783 interpro_description=Lumazine-binding protein)
|
|
ACD28_59_22
GWA2_PER_44_7, Peregrinibacteria, Bacteria
|
Not on your lists |
18532..18948
|
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
DMRL_synthase (db=HMMPfam db_id=PF00885 from=1 to=137 evalue=2.0e-46 interpro_id=IPR002180 interpro_description=6,7-dimethyl-8-ribityllumazine synthase GO=Biological Process: riboflavin biosynthetic process (GO:0009231), Cellular Component: riboflavin synthase complex (GO:0009349))
lumazine-synth: 6,7-dimethyl-8-ribityl (db=HMMTigr db_id=TIGR00114 from=1 to=136 evalue=2.2e-45 interpro_id=IPR002180 interpro_description=6,7-dimethyl-8-ribityllumazine synthase GO=Biological Process: riboflavin biosynthetic process (GO:0009231), Cellular Component: riboflavin synthase complex (GO:0009349))
Lumazine synthase (db=superfamily db_id=SSF52121 from=1 to=137 evalue=6.7e-42 interpro_id=IPR002180 interpro_description=6,7-dimethyl-8-ribityllumazine synthase GO=Biological Process: riboflavin biosynthetic process (GO:0009231), Cellular Component: riboflavin synthase complex (GO:0009349))
|
|
ACD28_59_23
GWA2_PER_44_7, Peregrinibacteria, Bacteria
|
Not on your lists |
comp(19082..21685)
|
ATP-dependent chaperone ClpB
ATP-dependent chaperone ClpB
ATP-dependent chaperone protein ClpB n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017446C3 (db=UNIREF evalue=0.0 bit_score=959.0 identity=56.7 coverage=98.7327188940092)
coiled-coil (db=Coil db_id=coil from=460 to=488 evalue=NA)
|
|
ACD28_59_24
GWA2_PER_44_7, Peregrinibacteria, Bacteria
|
Not on your lists |
comp(21814..22335)
|
hypothetical protein
seg (db=Seg db_id=seg from=9 to=31)
Uncharacterized protein {ECO:0000313|EMBL:KKT76682.1}; TaxID=1619057 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_44_7.;"
hypothetical protein alias=ACD28_C00059G00024,ACD28_16820.25165.12G0024,ACD28_16820.25165.12_24 id=31467 tax=ACD28 species=Arthrobacter chlorophenolicus genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria organism_group=PER organism_desc=PER
|
|
ACD28_59_25
GWA2_PER_44_7, Peregrinibacteria, Bacteria
|
Not on your lists |
24933..25202
|
FAD-dependent pyridine nucleotide-disulphide oxidoreductase; K03885 NADH dehydrogenase [EC:1.6.99.3] (db=KEGG evalue=4.0e-08 bit_score=60.5 identity=51.85 coverage=54.4444444444444)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
NADH DEHYDROGENASE-RELATED (db=HMMPanther db_id=PTHR22915 from=1 to=55 evalue=1.3e-06)
FAD/NAD(P)-binding domain (db=superfamily db_id=SSF51905 from=3 to=54 evalue=4.6e-06)
|