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ACD28_112

Alias: ACD28_28640.6526.10

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD28_112_1
GWA2_PER_44_7, Peregrinibacteria, Bacteria

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comp(170..814)
DNA (645bp) protein (215aa)
seg (db=Seg db_id=seg from=59 to=73)
transmembrane_regions (db=TMHMM db_id=tmhmm from=194 to=213)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_112_2
GWA2_PER_44_7, Peregrinibacteria, Bacteria

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1007..2011
DNA (1005bp) protein (335aa)
hypothetical protein
seg (db=Seg db_id=seg from=5 to=22)
seg (db=Seg db_id=seg from=312 to=325)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
ACD28_112_3

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2034..2483
DNA (450bp) protein (150aa)
metalloprotein
UPF0054 (db=PatternScan db_id=PS01306 from=116 to=126 evalue=0.0 interpro_id=IPR020549 interpro_description=Uncharacterised protein family UPF0054, conserved site)
UPF0054 (db=HMMPfam db_id=PF02130 from=22 to=143 evalue=3.2e-34 interpro_id=IPR002036 interpro_description=Uncharacterised protein family UPF0054 GO=Molecular Function: metallopeptidase activity (GO:0008237), Molecular Function: zinc ion binding (GO:0008270))
Metalloproteases ("zincins"), catalytic domain (db=superfamily db_id=SSF55486 from=5 to=148 evalue=5.1e-31)
ACD28_112_4

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comp(2487..2939)
DNA (453bp) protein (151aa)
2487..2939 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD93320.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_112_5
GWA2_PER_44_7, Peregrinibacteria, Bacteria

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comp(2942..3730)
DNA (789bp) protein (263aa)
seg (db=Seg db_id=seg from=220 to=233)
coiled-coil (db=Coil db_id=coil from=164 to=199 evalue=NA)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_112_6
GWA2_PER_44_7, Peregrinibacteria, Bacteria

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3802..4260
DNA (459bp) protein (153aa)
Drmip_Hesp (db=HMMPfam db_id=PF10342 from=55 to=129 evalue=1.0e-07)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_112_7

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4521..5516
DNA (996bp) protein (332aa)
rlmI; ribosomal RNA large subunit methyltransferase I
rlmI; ribosomal RNA large subunit methyltransferase I
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R577_9CHLA (db=UNIREF evalue=3.0e-86 bit_score=322.0 identity=58.55 coverage=89.4578313253012)
seg (db=Seg db_id=seg from=9 to=24)
ACD28_112_8

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comp(5607..5747)
DNA (141bp) protein (47aa)
5607..5747 - (rbs_motif=TAA rbs_spacer=14bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD93313.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_112_9

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5806..6096
DNA (291bp) protein (97aa)
hypothetical protein
seg (db=Seg db_id=seg from=3 to=20)
DUF156 (db=HMMPfam db_id=PF02583 from=9 to=90 evalue=4.0e-16 interpro_id=IPR003735 interpro_description=Protein of unknown function DUF156)
hypothetical protein alias=ACD28_C00112G00009,ACD28_28640.6526.10G0009,ACD28_28640.6526.10_9 id=32065 tax=ACD28 species=Thermosipho africanus genus=Thermosipho taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae organism_group=PER organism_desc=PER
ACD28_112_10

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6131..6331
DNA (201bp) protein (67aa)
HMA_1 (db=PatternScan db_id=PS01047 from=7 to=36 evalue=0.0 interpro_id=IPR017969 interpro_description=Heavy-metal-associated, conserved site GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
HMA, heavy metal-associated domain (db=superfamily db_id=SSF55008 from=1 to=65 evalue=1.6e-09 interpro_id=IPR006121 interpro_description=Heavy metal transport/detoxification protein GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
HMA (db=HMMPfam db_id=PF00403 from=4 to=62 evalue=2.7e-08 interpro_id=IPR006121 interpro_description=Heavy metal transport/detoxification protein GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
COPPER TRANSPORT PROTEIN ATOX1-RELATED (db=HMMPanther db_id=PTHR22814 from=10 to=36 evalue=1.1e-05)
ACD28_112_11

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6355..6564
DNA (210bp) protein (70aa)
HMA_1 (db=PatternScan db_id=PS01047 from=8 to=37 evalue=0.0 interpro_id=IPR017969 interpro_description=Heavy-metal-associated, conserved site GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
HMA, heavy metal-associated domain (db=superfamily db_id=SSF55008 from=1 to=66 evalue=3.0e-15 interpro_id=IPR006121 interpro_description=Heavy metal transport/detoxification protein GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
HMA (db=HMMPfam db_id=PF00403 from=6 to=64 evalue=2.5e-12 interpro_id=IPR006121 interpro_description=Heavy metal transport/detoxification protein GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
no description (db=Gene3D db_id=G3DSA:3.30.70.100 from=1 to=66 evalue=1.5e-11)
Displaying 11 items

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