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ACD28_31

Alias: ACD28_1013.15855.10

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD28_31_1

Not on your lists

comp(54..389)
DNA (336bp) protein (112aa)
helix-turn-helix family protein
Helix-turn-helix motif n=1 Tax=NC10 bacterium 'Dutch sediment' RepID=D5MKR2_9BACT (db=UNIREF evalue=7.0e-27 bit_score=122.0 identity=74.65 coverage=62.5)
seg (db=Seg db_id=seg from=77 to=95)
antidote_HigA: addiction module antidot (db=HMMTigr db_id=TIGR02607 from=3 to=83 evalue=6.9e-40 interpro_id=IPR013430 interpro_description=Addiction module antidote protein, HigA GO=Molecular Function: DNA binding (GO:0003677))
ACD28_31_2

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comp(467..682)
DNA (216bp) protein (72aa)
Plasmid maintenance system killer protein n=4 Tax=Lactobacillus jensenii RepID=C4VP83_9LACO (db=UNIREF evalue=1.0e-19 bit_score=98.6 identity=69.01 coverage=97.2222222222222)
hypothetical protein
Plasmid_killer (db=HMMPfam db_id=PF05015 from=1 to=71 evalue=4.4e-15 interpro_id=IPR007711 interpro_description=Plasmid maintenance system killer)
RelE-like (db=superfamily db_id=SSF143011 from=1 to=71 evalue=5.3e-10)
ACD28_31_3
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

799..1125
DNA (327bp) protein (109aa)
799..1125 + (rbs_motif=TAA rbs_spacer=6bp)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_31_4
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

1215..1430
DNA (216bp) protein (72aa)
UPF0150 (db=HMMPfam db_id=PF03681 from=7 to=48 evalue=2.4e-14 interpro_id=IPR005357 interpro_description=Uncharacterised protein family UPF0150)
TTHA1013-like (db=superfamily db_id=SSF143100 from=1 to=69 evalue=3.6e-10)
Putative uncharacterized protein Tax=GWA2_PER_44_7
ACD28_31_5
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

1423..1623
DNA (201bp) protein (67aa)
YcfA family protein
YcfA (db=HMMPfam db_id=PF07927 from=9 to=64 evalue=3.1e-20 interpro_id=IPR012933 interpro_description=YcfA-like)
YcfA/nrd intein domain (db=superfamily db_id=SSF54786 from=6 to=65 evalue=8.8e-15 interpro_id=IPR015146 interpro_description=Ribonucleotide reductase, stirrup)
no description (db=Gene3D db_id=G3DSA:3.30.920.30 from=2 to=66 evalue=6.3e-12)
ACD28_31_6
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

1627..2337
DNA (711bp) protein (237aa)
methyltransferase
seg (db=Seg db_id=seg from=118 to=138)
seg (db=Seg db_id=seg from=159 to=172)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=228 evalue=4.9e-19)
ACD28_31_7
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(2367..3089)
DNA (723bp) protein (241aa)
2367..3089 - (rbs_motif=TAA rbs_spacer=7bp)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_31_8
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

3207..3629
DNA (423bp) protein (141aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=15 to=26)
SLH (db=HMMPfam db_id=PF00395 from=30 to=73 evalue=2.9e-10 interpro_id=IPR001119 interpro_description=S-layer homology domain)
FAMILY NOT NAMED (db=HMMPanther db_id=PTHR22909 from=31 to=80 evalue=4.8e-05)
ACD28_31_9
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

3841..4215
DNA (375bp) protein (125aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=77 to=99)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=68)
seg (db=Seg db_id=seg from=81 to=95)
ACD28_31_10
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

4236..4637
DNA (402bp) protein (134aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Desulfitobacterium hafniense DCB-2 RepID=B8G077_DESHD (db=UNIREF evalue=1.0e-47 bit_score=191.0 identity=66.15 coverage=95.5223880597015)
3-demethylubiquinone-9 3-methyltransferase
no description (db=Gene3D db_id=G3DSA:3.10.180.30 from=1 to=128 evalue=1.1e-42)
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (db=superfamily db_id=SSF54593 from=1 to=131 evalue=1.5e-41)
ACD28_31_11
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

4725..5033
DNA (309bp) protein (103aa)
seg (db=Seg db_id=seg from=37 to=49)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_31_12

Not on your lists

comp(5114..6379)
DNA (1266bp) protein (422aa)
slpA; S-layer protein
S-layer glycoprotein protein, contains three N-terminal SLH domains n=2 Tax=Bacillus RepID=D3FZN5_BACPE (db=UNIREF evalue=1.0e-16 bit_score=91.7 identity=30.6 coverage=42.1800947867299)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
SLH (db=HMMPfam db_id=PF00395 from=38 to=81 evalue=2.1e-08 interpro_id=IPR001119 interpro_description=S-layer homology domain)
ACD28_31_13

Not on your lists

6478..7158
DNA (681bp) protein (227aa)
seg (db=Seg db_id=seg from=5 to=15)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=18 evalue=6.0)
Uncharacterized protein {ECO:0000313|EMBL:EKD94063.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_31_14
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

7184..7597
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5L081_9GAMM (db=UNIREF evalue=2.0e-24 bit_score=114.0 identity=35.34 coverage=95.6521739130435)
polyketide cyclase/dehydrase
Bet v1-like (db=superfamily db_id=SSF55961 from=1 to=137 evalue=3.4e-18)
Polyketide_cyc2 (db=HMMPfam db_id=PF10604 from=1 to=136 evalue=9.7e-12 interpro_id=IPR019587 interpro_description=Polyketide cyclase/dehydrase)
ACD28_31_15
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

7704..7973
DNA (270bp) protein (90aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_31_16
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

8056..9156
DNA (1101bp) protein (367aa)
protein kinase domain-containing protein
seg (db=Seg db_id=seg from=344 to=364)
seg (db=Seg db_id=seg from=275 to=288)
PROTEIN_KINASE_ST (db=PatternScan db_id=PS00108 from=193 to=205 evalue=0.0 interpro_id=IPR008271 interpro_description=Serine/threonine-protein kinase, active site GO=Molecular Function: protein serine/threonine kinase activity (GO:0004674), Biological Process: protein amino acid phosphorylation (GO:0006468))
ACD28_31_17
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

9223..9798
DNA (576bp) protein (192aa)
hypothetical protein
DUF1697 (db=HMMPfam db_id=PF08002 from=1 to=138 evalue=2.3e-37 interpro_id=IPR012545 interpro_description=Protein of unknown function DUF1697)
hypothetical protein alias=ACD28_1013.15855.10G0017,ACD28_1013.15855.10_17,ACD28_C00031G00017 id=31136 tax=ACD28 species=Leptospira interrogans genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes organism_group=PER organism_desc=PER
PF08002 family protein {ECO:0000313|EMBL:KKT74478.1}; TaxID=1619057 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_44_7.;"
ACD28_31_18

Not on your lists

comp(10512..10679)
DNA (168bp) protein (56aa)
excise: DNA binding domain, excisionase fami (db=HMMTigr db_id=TIGR01764 from=4 to=52 evalue=4.7e-14 interpro_id=IPR010093 interpro_description=Excisionase/Xis, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
Uncharacterized protein {ECO:0000313|EMBL:EKD94049.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_31_19

Not on your lists

11035..15891
DNA (4857bp) protein (1619aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=4 to=17)
TcdB_toxin_midN (db=HMMPfam db_id=PF12256 from=649 to=794 evalue=7.3e-21 interpro_id=IPR022045 interpro_description=Insecticide toxin TcdB middle/N-terminal region)
Displaying 19 items

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