Alias: ACD28_8886.34287.12
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD28_96_1
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
comp(1..1353)
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FeS assembly protein SufB
FeS assembly protein SufB
FeS assembly protein SufB n=8 Tax=Thermoanaerobacter RepID=B0K560_THEPX (db=UNIREF evalue=3.0e-162 bit_score=575.0 identity=60.54 coverage=98.2261640798226)
sufB: FeS assembly protein SufB (db=HMMTigr db_id=TIGR01980 from=11 to=451 evalue=2.9e-290 interpro_id=IPR010231 interpro_description=SUF system FeS cluster assembly, SufB GO=Molecular Function: protein binding (GO:0005515), Biological Process: iron-sulfur cluster assembly (GO:0016226))
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ACD28_96_2
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
comp(1544..2371)
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ABC transporter, ATP-binding protein n=2 Tax=Porphyromonas gingivalis RepID=Q7MXE1_PORGI (db=UNIREF evalue=2.0e-82 bit_score=308.0 identity=57.65 coverage=89.8550724637681)
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein
sufC: FeS assembly ATPase SufC (db=HMMTigr db_id=TIGR01978 from=11 to=259 evalue=1.7e-141 interpro_id=IPR010230 interpro_description=ATPase SufC, SUF system FeS cluster assembly GO=Molecular Function: ATP binding (GO:0005524), Biological Process: transport (GO:0006810))
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ACD28_96_3
uncultured bacterium, Bacteria
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Not on your lists |
comp(2392..2838)
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Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GCR1_9FIRM (db=UNIREF evalue=8.0e-22 bit_score=105.0 identity=39.71 coverage=89.261744966443)
BadM/Rrf2 family transcriptional regulator
HTH_RRF2_1 (db=PatternScan db_id=PS01332 from=50 to=68 evalue=0.0 interpro_id=IPR000944 interpro_description=Transcription regulator Rrf2)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=6 to=133 evalue=3.6e-30)
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ACD28_96_4
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
2939..3538
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2939..3538 + (rbs_motif=TAA rbs_spacer=8bp)
hypothetical protein Tax=GWA2_PER_44_7
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ACD28_96_5
uncultured bacterium, Bacteria
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Not on your lists |
comp(3607..5352)
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ABC transporter family protein
ABC transporter, transmembrane region:ABC transporter related protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GNZ0_9BURK (db=UNIREF evalue=3.0e-62 bit_score=243.0 identity=31.44 coverage=96.7353951890034)
transmembrane_regions (db=TMHMM db_id=tmhmm from=139 to=161)
transmembrane_regions (db=TMHMM db_id=tmhmm from=165 to=187)
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ACD28_96_6
uncultured bacterium, Bacteria
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Not on your lists |
comp(5362..6303)
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hypothetical protein
coiled-coil (db=Coil db_id=coil from=174 to=195 evalue=NA)
coiled-coil (db=Coil db_id=coil from=218 to=239 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=38)
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ACD28_96_7
uncultured bacterium, Bacteria
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Not on your lists |
comp(6329..11806)
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hypothetical protein
seg (db=Seg db_id=seg from=179 to=196)
seg (db=Seg db_id=seg from=727 to=738)
seg (db=Seg db_id=seg from=1149 to=1253)
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ACD28_96_8
uncultured bacterium, Bacteria
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Not on your lists |
comp(11907..12116)
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11907..12116 - (rbs_motif=TAA rbs_spacer=10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD92551.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD28_96_9
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
12546..12752
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Putative uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1U6_9BACT (db=UNIREF evalue=5.0e-09 bit_score=63.5 identity=46.97 coverage=92.7536231884058)
Uncharacterized protein {ECO:0000313|EMBL:KKT76546.1}; TaxID=1619057 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_44_7.;"
hypothetical protein
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ACD28_96_10
uncultured bacterium, Bacteria
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Not on your lists |
12864..13394
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type 12 methyltransferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=73 to=95)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=2 to=23)
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ACD28_96_11
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
13407..13997
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putative RNA methylase
seg (db=Seg db_id=seg from=19 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
UNCHARACTERIZED (db=HMMPanther db_id=PTHR13610 from=18 to=169 evalue=3.0e-26)
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ACD28_96_12
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
comp(13994..15409)
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comEC; competence protein ComEC
transmembrane_regions (db=TMHMM db_id=tmhmm from=382 to=401)
transmembrane_regions (db=TMHMM db_id=tmhmm from=345 to=367)
transmembrane_regions (db=TMHMM db_id=tmhmm from=316 to=338)
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ACD28_96_13
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
15519..17033
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cell envelope-related transcriptional attenuator
seg (db=Seg db_id=seg from=11 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=46 to=68)
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ACD28_96_14
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
17053..17754
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ribosomal large subunit pseudouridine synthase B (EC:5.4.99.-)
PSI_RSU (db=PatternScan db_id=PS01149 from=100 to=114 evalue=0.0 interpro_id=IPR018496 interpro_description=Pseudouridine synthase, RsuA and RluB/E/F, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866))
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600 from=5 to=229 evalue=3.4e-64)
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600:SF2 from=5 to=229 evalue=3.4e-64)
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ACD28_96_15
uncultured bacterium, Bacteria
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Not on your lists |
17780..18679
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Serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
no description (db=Gene3D db_id=G3DSA:3.40.710.10 from=43 to=297 evalue=2.8e-69)
Peptidase_S11 (db=HMMPfam db_id=PF00768 from=50 to=280 evalue=1.2e-65 interpro_id=IPR001967 interpro_description=Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO=Biological Process: proteolysis (GO:0006508), Molecular Function: serine-type D-Ala-D-Ala carboxypeptidase activity (GO:0009002))
D-ALANYL-D-ALANINE CARBOXYPEPTIDASE (db=HMMPanther db_id=PTHR21581 from=49 to=299 evalue=2.1e-60)
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ACD28_96_16
uncultured bacterium, Bacteria
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Not on your lists |
18847..19914
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hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=144 to=162)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
transmembrane_regions (db=TMHMM db_id=tmhmm from=77 to=99)
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ACD28_96_17
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
comp(19909..21906)
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coiled-coil (db=Coil db_id=coil from=11 to=32 evalue=NA)
coiled-coil (db=Coil db_id=coil from=536 to=560 evalue=NA)
seg (db=Seg db_id=seg from=114 to=124)
seg (db=Seg db_id=seg from=522 to=540)
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ACD28_96_18
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
comp(21930..22532)
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BldN RNA polymerase, sigma-24 subunit, ECF subfamily
RNA polymerase ECF-subfamily sigma factor n=3 Tax=Streptomyces RepID=D6KA62_9ACTO (db=UNIREF evalue=2.0e-20 bit_score=102.0 identity=34.81 coverage=88.0597014925373)
seg (db=Seg db_id=seg from=57 to=72)
seg (db=Seg db_id=seg from=8 to=13)
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ACD28_96_19
uncultured bacterium, Bacteria
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Not on your lists |
comp(22611..23486)
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fructose-1,6-bisphosphatase (EC:3.1.3.11)
Chloroplast sedoheptulose-1,7-bisphosphatase n=1 Tax=Solanum lycopersicum RepID=C5IU71_SOLLC (db=UNIREF evalue=1.0e-68 bit_score=263.0 identity=49.43 coverage=88.013698630137)
seg (db=Seg db_id=seg from=14 to=29)
FBPASE (db=PatternScan db_id=PS00124 from=231 to=243 evalue=0.0 interpro_id=IPR020548 interpro_description=Fructose-1,6-bisphosphatase, active site GO=Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: phosphoric ester hydrolase activity (GO:0042578))
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ACD28_96_20
uncultured bacterium, Bacteria
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Not on your lists |
comp(23509..24516)
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gap; glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.-)
GAPDH (db=PatternScan db_id=PS00071 from=150 to=157 evalue=0.0 interpro_id=IPR020830 interpro_description=Glyceraldehyde 3-phosphate dehydrogenase, active site)
GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (db=HMMPanther db_id=PTHR10836 from=2 to=334 evalue=1.8e-150 interpro_id=IPR000173 interpro_description=Glyceraldehyde 3-phosphate dehydrogenase subfamily GO=Molecular Function: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity (GO:0004365), Biological Process: glucose metabolic process (GO:0006006), Molecular Function: NAD or NADH binding (GO:0051287), Biological Process: oxidation reduction (GO:0055114))
GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (db=HMMPanther db_id=PTHR10836:SF4 from=2 to=334 evalue=1.8e-150)
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ACD28_96_21
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
comp(24531..25658)
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fructose-bisphosphate aldolase
seg (db=Seg db_id=seg from=153 to=165)
F_bP_aldolase (db=HMMPfam db_id=PF01116 from=47 to=357 evalue=5.7e-58 interpro_id=IPR000771 interpro_description=Ketose-bisphosphate aldolase, class-II GO=Molecular Function: fructose-bisphosphate aldolase activity (GO:0004332), Biological Process: glycolysis (GO:0006096), Molecular Function: zinc ion binding (GO:0008270))
Aldolase (db=superfamily db_id=SSF51569 from=46 to=367 evalue=7.5e-58)
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ACD28_96_22
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
comp(25783..26133)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=22 to=44)
seg (db=Seg db_id=seg from=3 to=15)
hypothetical protein Tax=GWA2_PER_44_7
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ACD28_96_23
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
comp(26155..27099)
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rsmH; 16S rRNA (N4-methyl-C1402)-methyltransferase
seg (db=Seg db_id=seg from=25 to=37)
seg (db=Seg db_id=seg from=193 to=207)
seg (db=Seg db_id=seg from=225 to=236)
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ACD28_96_24
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
comp(27369..27989)
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translation factor SUA5
YrdC/RibB (db=superfamily db_id=SSF55821 from=6 to=202 evalue=7.7e-48 interpro_id=IPR017945 interpro_description=DHBP synthase RibB-like alpha/beta domain)
TIGR00057: Sua5/YciO/YrdC/YwlC family prote (db=HMMTigr db_id=TIGR00057 from=1 to=198 evalue=2.8e-46 interpro_id=IPR004388 interpro_description=Sua5/YciO/YrdC/YwlC)
no description (db=Gene3D db_id=G3DSA:3.90.870.10 from=1 to=202 evalue=4.3e-45 interpro_id=IPR017945 interpro_description=DHBP synthase RibB-like alpha/beta domain)
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ACD28_96_25
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
28140..29147
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Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AFD2_CARHZ (db=UNIREF evalue=7.0e-132 bit_score=473.0 identity=66.27 coverage=99.4047619047619)
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
GAPDH (db=PatternScan db_id=PS00071 from=150 to=157 evalue=0.0 interpro_id=IPR020830 interpro_description=Glyceraldehyde 3-phosphate dehydrogenase, active site)
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ACD28_96_26
uncultured bacterium, Bacteria
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Not on your lists |
comp(29191..30939)
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29191..30939 - (rbs_motif=TAA rbs_spacer=11bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD92540.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD28_96_27
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
31127..33400
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metC; putative cystathionine gamma-synthase protein (db=KEGG evalue=1.0e-12 bit_score=79.3 identity=21.15 coverage=52.2427440633245)
seg (db=Seg db_id=seg from=209 to=224)
seg (db=Seg db_id=seg from=716 to=730)
seg (db=Seg db_id=seg from=272 to=285)
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ACD28_96_28
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
33509..34231
|
Heat-inducible transcription repressor hrcA
Transcriptional regulator of heat shock gene n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2634 (db=UNIREF evalue=1.0e-27 bit_score=127.0 identity=33.05 coverage=93.3609958506224)
coiled-coil (db=Coil db_id=coil from=87 to=108 evalue=NA)
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=4 to=87 evalue=4.5e-28 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
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ACD28_96_29
GWA2_PER_44_7, Peregrinibacteria, Bacteria
|
Not on your lists |
34250..34324
|
34250..34324 + (rbs_motif=TAA rbs_spacer=11bp)
Protein GrpE Tax=GWA2_PER_44_7
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