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ACD28_96_14

Organism: ACD28

near complete RP 49 / 55 MC: 12 BSCG 45 / 51 MC: 2 ASCG 0 / 38
Location: 17053..17754

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase B (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 235.0
  • Bit_score: 203
  • Evalue 5.00e-50
PSI_RSU (db=PatternScan db_id=PS01149 from=100 to=114 evalue=0.0 interpro_id=IPR018496 interpro_description=Pseudouridine synthase, RsuA and RluB/E/F, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600 from=5 to=229 evalue=3.4e-64) iprscan interpro
DB: HMMPanther
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.40e-64

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Taxonomy

GWA2_PER_44_7 → Peregrinibacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGCGGCTCAATAAATTTATCGCTCAATCGGGCTACTGTTCAAGGCGACATGCCGATCGGTTAATCGAGGAAGGAAAAGTCGAAATCAATGGAAAACTTCAAAAAGAATTGGGCGTATTGATTGATCCCGATCATGATGAAATTAAAGTGGACGGACAAACGCTCTCAAAACCAGAACAATTCCTTTATGTGATGATGAATAAACCAAAAGGATATGTCACCACAAAATCAGATCCTCATGCGGAACACACCATTTTCTCATTGCTACCGGAGGCCCTTCAAAATCTTCATCCCGTAGGGCGGCTCGATAAAAACACGGAAGGACTTTTAATTCTTACGAATGACGGAAGCTTCACCTACTCCATGACCCACCCGGGCCAAAATTGTGAAAAGGTCTATTCCGCGCGGCTAAAAAAATGCCCGCTGAAACAAGAAATCCAACGATTGGAACGAGGTATTTTTATCGAAGAAGAAGTGAATGGGAAAAAAAGTTTTTATAAAACCCAACCCTGCCGCATTGAAGTTTTTCCGGAAACTAAAAAAGTGGTTATCCATCTTAAAGAAGGCCGAAAACGACAAATCCGAAAAATGTTCCAAAAGATCGGACACCCCGTGCTATATTTAAAACGTTTAAAAATGGGCCCCTACGAGCTCGGCGAACTAAAAACAGGTGAATGGTGCGAAATCGCACCAGCACAATAA
PROTEIN sequence
Length: 234
MRLNKFIAQSGYCSRRHADRLIEEGKVEINGKLQKELGVLIDPDHDEIKVDGQTLSKPEQFLYVMMNKPKGYVTTKSDPHAEHTIFSLLPEALQNLHPVGRLDKNTEGLLILTNDGSFTYSMTHPGQNCEKVYSARLKKCPLKQEIQRLERGIFIEEEVNGKKSFYKTQPCRIEVFPETKKVVIHLKEGRKRQIRKMFQKIGHPVLYLKRLKMGPYELGELKTGEWCEIAPAQ*