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ACD28_33

Alias: ACD28_10498.16745.12

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD28_33_1
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(1..1095)
DNA (1095bp) protein (365aa)
RNA methyltransferase, TrmA family
RNA M5U METHYLTRANSFERASE FAMILY (db=HMMPanther db_id=PTHR11061 from=29 to=365 evalue=4.9e-78)
RNA M5U METHYLTRANSFERASE (db=HMMPanther db_id=PTHR11061:SF2 from=29 to=365 evalue=4.9e-78)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=83 to=364 evalue=2.5e-39)
ACD28_33_2
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(1169..1963)
DNA (795bp) protein (265aa)
seg (db=Seg db_id=seg from=186 to=193)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_33_3

Not on your lists

2025..2123
DNA (99bp) protein (33aa)
2025..2123 + (rbs_motif=TAA rbs_spacer=11bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD93972.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_33_4

Not on your lists

2141..3019
DNA (879bp) protein (293aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXV3_9BACT (db=UNIREF evalue=3.0e-66 bit_score=255.0 identity=53.99 coverage=93.8566552901024)
hypothetical protein
seg (db=Seg db_id=seg from=51 to=65)
seg (db=Seg db_id=seg from=99 to=110)
ACD28_33_5
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

3079..3327
DNA (249bp) protein (83aa)
coiled-coil (db=Coil db_id=coil from=44 to=65 evalue=NA)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_33_6
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

3328..3606
DNA (279bp) protein (93aa)
addiction module antitoxin
RelE-like (db=superfamily db_id=SSF143011 from=3 to=88 evalue=3.2e-18)
Plasmid_stabil (db=HMMPfam db_id=PF05016 from=6 to=89 evalue=8.4e-10 interpro_id=IPR007712 interpro_description=Plasmid stabilisation system)
RelE_StbE: addiction module toxin, RelE/Stb (db=HMMTigr db_id=TIGR02385 from=5 to=89 evalue=0.00079 interpro_id=IPR012753 interpro_description=Addiction module toxin, RelE/StbE)
ACD28_33_7
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

3621..4082
DNA (462bp) protein (154aa)
hypothetical protein
alpha/beta knot (db=superfamily db_id=SSF75217 from=1 to=152 evalue=7.3e-46)
Predicted methyltransferase, bacterial type (db=HMMPIR db_id=PIRSF004505 from=1 to=153 evalue=1.9e-40 interpro_id=IPR003742 interpro_description=SPOUT methyltransferase, predicted GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: rRNA processing (GO:0006364), Molecular Function: methyltransferase activity (GO:0008168))
SPOUT_MTase (db=HMMPfam db_id=PF02590 from=1 to=152 evalue=8.0e-36 interpro_id=IPR003742 interpro_description=SPOUT methyltransferase, predicted GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: rRNA processing (GO:0006364), Molecular Function: methyltransferase activity (GO:0008168))
ACD28_33_8

Not on your lists

4254..5300
DNA (1047bp) protein (349aa)
putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
seg (db=Seg db_id=seg from=2 to=13)
seg (db=Seg db_id=seg from=37 to=49)
no description (db=HMMSmart db_id=SM00854 from=58 to=302 evalue=2.3e-56 interpro_id=IPR019079 interpro_description=Capsule synthesis protein, CapA)
ACD28_33_9
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(5318..8620)
DNA (3303bp) protein (1101aa)
SNF2-related protein n=1 Tax=Arthrobacter sp. FB24 RepID=A0K1K3_ARTS2 (db=UNIREF evalue=0.0 bit_score=668.0 identity=36.88 coverage=98.5467756584923)
helicase/SNF2 family domain-containing protein
helicase/SNF2 family domain-containing protein
ATP-DEPENDENT HELICASE SMARCA (SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN A)-RELATED (db=HMMPanther db_id=PTHR10799 from=385 to=1099 evalue=2.0e-186)
ACD28_33_10
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(8680..8970)
DNA (291bp) protein (97aa)
8680..8970 - (rbs_motif=TAA rbs_spacer=15bp)
Uncharacterized protein {ECO:0000313|EMBL:KKT77204.1}; TaxID=1619057 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_44_7.;"
ACD28_33_11

Not on your lists

comp(8967..9926)
DNA (960bp) protein (320aa)
hypothetical protein
ATP-binding region, ATPase-like protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VVG0_MARMS (db=UNIREF evalue=2.0e-07 bit_score=60.5 identity=23.78 coverage=51.875)
seg (db=Seg db_id=seg from=201 to=214)
seg (db=Seg db_id=seg from=292 to=297)
ACD28_33_12
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

10131..11300
DNA (1170bp) protein (390aa)
seg (db=Seg db_id=seg from=64 to=75)
seg (db=Seg db_id=seg from=45 to=52)
seg (db=Seg db_id=seg from=2 to=20)
coiled-coil (db=Coil db_id=coil from=138 to=190 evalue=NA)
ACD28_33_13
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

11313..11519
DNA (207bp) protein (69aa)
coiled-coil (db=Coil db_id=coil from=10 to=31 evalue=NA)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_33_14
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

11563..12621
DNA (1059bp) protein (353aa)
coiled-coil (db=Coil db_id=coil from=138 to=159 evalue=NA)
coiled-coil (db=Coil db_id=coil from=172 to=225 evalue=NA)
seg (db=Seg db_id=seg from=152 to=165)
seg (db=Seg db_id=seg from=183 to=198)
ACD28_33_15
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

12651..12878
DNA (228bp) protein (76aa)
seg (db=Seg db_id=seg from=2 to=21)
coiled-coil (db=Coil db_id=coil from=1 to=40 evalue=NA)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_33_16

Not on your lists

12923..13783
DNA (861bp) protein (287aa)
12923..13783 + (rbs_motif=TAA rbs_spacer=11bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD93985.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_33_17

Not on your lists

13793..13996
DNA (204bp) protein (68aa)
13793..13996 + (rbs_motif=TAA rbs_spacer=9bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD93986.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_33_18

Not on your lists

comp(14274..14609)
DNA (336bp) protein (112aa)
14274..14609 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD93987.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_33_19

Not on your lists

comp(14682..15290)
DNA (609bp) protein (203aa)
14682..15290 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD93988.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_33_20
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(15761..16294)
DNA (534bp) protein (178aa)
hypothetical protein
seg (db=Seg db_id=seg from=121 to=132)
DUF88 (db=HMMPfam db_id=PF01936 from=11 to=132 evalue=3.9e-11)
protein of unknown function DUF88 alias=ACD28_10498.16745.12G0020,ACD28_10498.16745.12_20,ACD28_C00033G00020 id=31168 tax=ACD28 species=unknown genus=unknown taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria organism_group=PER organism_desc=PER
ACD28_33_21
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(16306..16782)
DNA (477bp) protein (159aa)
transketolase
TK C-terminal domain-like (db=superfamily db_id=SSF52922 from=26 to=158 evalue=9.2e-20 interpro_id=IPR009014 interpro_description=Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
1-DEOXYXYLULOSE-5-PHOSPHATE SYNTHASE (db=HMMPanther db_id=PTHR11624:SF20 from=18 to=157 evalue=1.2e-15)
DEHYDROGENASE RELATED (db=HMMPanther db_id=PTHR11624 from=18 to=157 evalue=1.2e-15)
Displaying 21 items

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