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ACD28_114

Alias: ACD28_23627.18011.12

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD28_114_1
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(1..1194)
DNA (1194bp) protein (398aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FZJ3_ABIDE (db=UNIREF evalue=5.0e-67 bit_score=258.0 identity=38.73 coverage=92.964824120603)
seg (db=Seg db_id=seg from=1 to=16)
TIGR00275: flavoprotein, HI0933 family (db=HMMTigr db_id=TIGR00275 from=4 to=398 evalue=5.4e-126 interpro_id=IPR004792 interpro_description=Conserved hypothetical protein CHP00275, flavoprotein HI0933-like)
ACD28_114_2
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

1268..1438
DNA (171bp) protein (57aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_114_3
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(1549..2589)
DNA (1041bp) protein (347aa)
hypothetical protein
seg (db=Seg db_id=seg from=336 to=345)
seg (db=Seg db_id=seg from=25 to=41)
hypothetical protein alias=ACD28_C00114G00003,ACD28_23627.18011.12G0003,ACD28_23627.18011.12_3 id=32080 tax=ACD28 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes organism_group=PER organism_desc=PER
ACD28_114_4
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

2644..3207
DNA (564bp) protein (188aa)
hypothetical protein
seg (db=Seg db_id=seg from=5 to=20)
coiled-coil (db=Coil db_id=coil from=164 to=185 evalue=NA)
DUF151 (db=HMMPfam db_id=PF02577 from=12 to=139 evalue=1.8e-37 interpro_id=IPR003729 interpro_description=Protein of unknown function DUF151)
ACD28_114_5
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(3242..4678)
DNA (1437bp) protein (479aa)
pepA; Leucyl aminopeptidase (EC:3.4.11.1)
pepA; Leucyl aminopeptidase (EC:3.4.11.1)
UPI0001D5B9BC related cluster n=1 Tax=unknown RepID=UPI0001D5B9BC (db=UNIREF evalue=2.0e-87 bit_score=327.0 identity=36.97 coverage=99.1649269311065)
CYTOSOL_AP (db=PatternScan db_id=PS00631 from=324 to=331 evalue=0.0 interpro_id=IPR000819 interpro_description=Peptidase M17, leucyl aminopeptidase, C-terminal GO=Molecular Function: aminopeptidase activity (GO:0004177), Cellular Component: intracellular (GO:0005622), Biological Process: proteolysis (GO:0006508))
ACD28_114_6
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(4700..5701)
DNA (1002bp) protein (334aa)
exopolyphosphatase family protein
Exopolyphosphatase family protein n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VSK1_CLOBO (db=UNIREF evalue=6.0e-36 bit_score=155.0 identity=34.48 coverage=85.0299401197605)
seg (db=Seg db_id=seg from=302 to=313)
DHH phosphoesterases (db=superfamily db_id=SSF64182 from=27 to=327 evalue=1.6e-57)
ACD28_114_7

Not on your lists

6077..7972
DNA (1896bp) protein (632aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=461 to=471)
seg (db=Seg db_id=seg from=21 to=32)
seg (db=Seg db_id=seg from=487 to=499)
ACD28_114_8
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(8065..8991)
DNA (927bp) protein (309aa)
Thioredoxin reductase TrxB-3
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
PYRIDINE_REDOX_2 (db=PatternScan db_id=PS00573 from=135 to=155 evalue=0.0 interpro_id=IPR008255 interpro_description=Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO=Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation reduction (GO:0055114))
PNDRDTASEII (db=FPrintScan db_id=PR00469 from=128 to=140 evalue=5.1e-53 interpro_id=IPR000103 interpro_description=Pyridine nucleotide-disulphide oxidoreductase, class-II GO=Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation reduction (GO:0055114))
ACD28_114_9
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(9175..9690)
DNA (516bp) protein (172aa)
cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
seg (db=Seg db_id=seg from=9 to=27)
seg (db=Seg db_id=seg from=109 to=129)
CobA_CobO_BtuR (db=HMMPfam db_id=PF02572 from=2 to=171 evalue=6.3e-59 interpro_id=IPR003724 interpro_description=Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: cob(I)yrinic acid a,c-diamide adenosyltransferase activity (GO:0008817), Biological Process: cobalamin biosynthetic process (GO:0009236))
ACD28_114_10
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(9700..12066)
DNA (2367bp) protein (789aa)
seg (db=Seg db_id=seg from=133 to=151)
coiled-coil (db=Coil db_id=coil from=519 to=540 evalue=NA)
coiled-coil (db=Coil db_id=coil from=724 to=745 evalue=NA)
seg (db=Seg db_id=seg from=78 to=90)
ACD28_114_11
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(12348..13118)
DNA (771bp) protein (257aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=224 to=246)
Lamin A/C globular tail domain (db=superfamily db_id=SSF74853 from=8 to=96 evalue=2.3e-10)
Putative uncharacterized protein Tax=GWA2_PER_44_7
ACD28_114_12

Not on your lists

13689..15215
DNA (1527bp) protein (509aa)
metal dependent phosphohydrolase (EC:3.1.4.16)
metal dependent phosphohydrolase (EC:3.1.4.16)
Metal dependent phosphohydrolase n=1 Tax=Thermincola sp. JR RepID=D5XES0_9FIRM (db=UNIREF evalue=3.0e-136 bit_score=489.0 identity=51.41 coverage=96.2671905697446)
coiled-coil (db=Coil db_id=coil from=65 to=142 evalue=NA)
ACD28_114_13
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

15645..16001
DNA (357bp) protein (119aa)
15645..16001 + (rbs_motif=TAA rbs_spacer=10bp)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_114_14
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

16160..16462
DNA (303bp) protein (101aa)
chaperonin Cpn10
no description (db=HMMSmart db_id=SM00883 from=6 to=99 evalue=2.4e-45 interpro_id=IPR001476 interpro_description=Chaperonin Cpn10, subgroup GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: protein folding (GO:0006457))
GROES CHAPERONIN (db=HMMPanther db_id=PTHR10772 from=1 to=100 evalue=5.0e-36 interpro_id=IPR001476 interpro_description=Chaperonin Cpn10, subgroup GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: protein folding (GO:0006457))
GroES-like (db=superfamily db_id=SSF50129 from=5 to=100 evalue=2.5e-31 interpro_id=IPR011032 interpro_description=GroES-like)
ACD28_114_15

Not on your lists

16494..18047
DNA (1554bp) protein (518aa)
groEL; molecular chaperone GroEL
groEL; molecular chaperone GroEL
Chaperonin GroEL n=1 Tax=Bacillus tusciae DSM 2912 RepID=D5WSC4_9BACL (db=UNIREF evalue=0.0 bit_score=637.0 identity=66.47 coverage=99.2277992277992)
seg (db=Seg db_id=seg from=404 to=417)
Displaying 15 items

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