ggKbase home page

ACD28_115

Alias: ACD28_23779.12905.11

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD28_115_1

Not on your lists

222..1199
DNA (978bp) protein (326aa)
seg (db=Seg db_id=seg from=263 to=273)
Uncharacterized protein {ECO:0000313|EMBL:EKD93456.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_115_2

Not on your lists

1280..2629
DNA (1350bp) protein (450aa)
S-layer domain-containing protein
S-layer glycoprotein protein, contains three N-terminal SLH domains n=2 Tax=Bacillus RepID=D3FZN5_BACPE (db=UNIREF evalue=6.0e-15 bit_score=85.9 identity=31.68 coverage=33.1111111111111)
transmembrane_regions (db=TMHMM db_id=tmhmm from=3 to=25)
seg (db=Seg db_id=seg from=3 to=12)
ACD28_115_3

Not on your lists

comp(2634..3038)
DNA (405bp) protein (135aa)
seg (db=Seg db_id=seg from=4 to=25)
Uncharacterized protein {ECO:0000313|EMBL:EKD93458.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_115_4

Not on your lists

comp(3128..4267)
DNA (1140bp) protein (380aa)
A/G-specific adenine glycosylase
A/G-specific adenine glycosylase
A/G-specific DNA-adenine glycosylase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LLV9_SYNFM (db=UNIREF evalue=1.0e-92 bit_score=343.0 identity=48.7 coverage=90.5263157894737)
NUDIX_BOX (db=PatternScan db_id=PS00893 from=281 to=302 evalue=0.0 interpro_id=IPR020084 interpro_description=NUDIX hydrolase, conserved site GO=Molecular Function: hydrolase activity (GO:0016787))
ACD28_115_5

Not on your lists

4401..5024
DNA (624bp) protein (208aa)
nitroreductase
no description (db=Gene3D db_id=G3DSA:3.40.109.10 from=1 to=206 evalue=3.7e-52)
FMN-dependent nitroreductase-like (db=superfamily db_id=SSF55469 from=3 to=206 evalue=2.7e-47 interpro_id=IPR000415 interpro_description=Nitroreductase-like GO=Molecular Function: oxidoreductase activity (GO:0016491))
Nitroreductase (db=HMMPfam db_id=PF00881 from=10 to=185 evalue=1.2e-28 interpro_id=IPR000415 interpro_description=Nitroreductase-like GO=Molecular Function: oxidoreductase activity (GO:0016491))
ACD28_115_6
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(5052..5735)
DNA (684bp) protein (228aa)
hypothetical protein
seg (db=Seg db_id=seg from=73 to=87)
MoCo carrier protein-like (db=superfamily db_id=SSF102405 from=23 to=207 evalue=4.5e-44)
no description (db=Gene3D db_id=G3DSA:3.40.50.450 from=29 to=218 evalue=1.6e-32)
ACD28_115_7
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

5933..6412
DNA (480bp) protein (160aa)
5933..6412 + (rbs_motif=TAA rbs_spacer=12bp)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_115_8
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

6827..7375
DNA (549bp) protein (183aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_115_9
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(7470..8474)
DNA (1005bp) protein (335aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=35 to=331 evalue=3.1e-35)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=25 to=330 evalue=1.0e-31)
ACD28_115_10
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(8529..9668)
DNA (1140bp) protein (380aa)
peptidase M20
PEPTIDASE M20 FAMILY MEMBER (db=HMMPanther db_id=PTHR11014 from=9 to=373 evalue=1.5e-47)
Zn-dependent exopeptidases (db=superfamily db_id=SSF53187 from=1 to=367 evalue=2.4e-46)
no description (db=Gene3D db_id=G3DSA:3.40.630.10 from=7 to=367 evalue=1.1e-41)
ACD28_115_11
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(9655..11064)
DNA (1410bp) protein (470aa)
glutamate--cysteine ligase (EC:6.3.2.2)
seg (db=Seg db_id=seg from=120 to=136)
Glutamine synthetase/guanido kinase (db=superfamily db_id=SSF55931 from=28 to=460 evalue=1.4e-34)
GCS2 (db=HMMPfam db_id=PF04107 from=89 to=343 evalue=4.6e-29 interpro_id=IPR006336 interpro_description=Glutamate--cysteine ligase, GCS2 GO=Molecular Function: glutamate-cysteine ligase activity (GO:0004357), Biological Process: glutathione biosynthetic process (GO:0006750))
ACD28_115_12

Not on your lists

11238..12680
DNA (1443bp) protein (481aa)
seg (db=Seg db_id=seg from=113 to=124)
PLP-dependent transferases (db=superfamily db_id=SSF53383 from=131 to=477 evalue=6.4e-20 interpro_id=IPR015424 interpro_description=Pyridoxal phosphate-dependent transferase, major domain)
Aminotran_1_2 (db=HMMPfam db_id=PF00155 from=150 to=432 evalue=4.2e-17 interpro_id=IPR004839 interpro_description=Aminotransferase, class I/classII GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: transferase activity, transferring nitrogenous groups (GO:0016769), Molecular Function: pyridoxal phosphate binding (GO:0030170))
no description (db=Gene3D db_id=G3DSA:3.40.640.10 from=131 to=379 evalue=1.5e-10 interpro_id=IPR015421 interpro_description=Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: pyridoxal phosphate binding (GO:0030170))
ACD28_115_13
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

12731..12943
DNA (213bp) protein (71aa)
ATPase, AAA family n=2 Tax=Clostridium butyricum RepID=B1QYV9_CLOBU (db=UNIREF evalue=2.0e-17 bit_score=90.9 identity=53.52 coverage=98.5915492957747)
ATPase AAA
HOLLIDAY JUNCTION DNA HELICASE RUVB-RELATED (db=HMMPanther db_id=PTHR13779 from=12 to=71 evalue=7.9e-22)
WERNER HELICASE INTERACTING PROTEIN (db=HMMPanther db_id=PTHR13779:SF1 from=12 to=71 evalue=7.9e-22)
Displaying 13 items

View Taxonomy