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ACD28_91

Alias: ACD28_71342.11769.11

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD28_91_1

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31..543
DNA (513bp) protein (171aa)
31..543 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD92689.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_91_2

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comp(532..726)
DNA (195bp) protein (65aa)
532..726 - (rbs_motif=TAA rbs_spacer=8bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD92690.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_91_3

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878..1198
DNA (321bp) protein (107aa)
hypothetical protein
DsrEFH-like (db=superfamily db_id=SSF75169 from=1 to=106 evalue=6.0e-15)
DrsE (db=HMMPfam db_id=PF02635 from=1 to=106 evalue=1.9e-09 interpro_id=IPR003787 interpro_description=Sulphur relay, DsrE/F-like protein)
no description (db=Gene3D db_id=G3DSA:3.40.1260.10 from=5 to=106 evalue=3.3e-06)
ACD28_91_4

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1903..3033
DNA (1131bp) protein (377aa)
1903..3033 + (rbs_motif=TAA rbs_spacer=11bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD92679.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_91_5

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3176..3748
DNA (573bp) protein (191aa)
hypothetical protein
Putative uncharacterized protein n=3 Tax=Bacillus RepID=C3AL02_BACMY (db=UNIREF evalue=1.0e-79 bit_score=298.0 identity=74.87 coverage=97.3821989528796)
Uncharacterized protein {ECO:0000313|EMBL:EKD92680.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_91_6

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3864..4283
DNA (420bp) protein (140aa)
3864..4283 + (rbs_motif=TAA rbs_spacer=10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD92681.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_91_7

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comp(4369..4725)
DNA (357bp) protein (119aa)
alkylphosphonate utilization operon protein PhnA
phnA: putative alkylphosphonate utilization (db=HMMTigr db_id=TIGR00686 from=3 to=118 evalue=3.0e-40 interpro_id=IPR004624 interpro_description=PhnA protein)
Prokaryotic SH3-related domain (db=superfamily db_id=SSF82057 from=43 to=118 evalue=4.5e-27)
PhnA (db=HMMPfam db_id=PF03831 from=49 to=104 evalue=5.4e-26 interpro_id=IPR013988 interpro_description=PhnA protein, C-terminal)
ACD28_91_8

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comp(4763..5662)
DNA (900bp) protein (300aa)
4763..5662 - (rbs_motif=TAA rbs_spacer=12bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD92683.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_91_9

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comp(5731..6006)
DNA (276bp) protein (92aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=53)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein {ECO:0000313|EMBL:EKD92684.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_91_10

Not on your lists

6125..6766
DNA (642bp) protein (214aa)
DedA family membrane protein
seg (db=Seg db_id=seg from=68 to=79)
seg (db=Seg db_id=seg from=51 to=60)
transmembrane_regions (db=TMHMM db_id=tmhmm from=183 to=205)
ACD28_91_11

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6846..7397
DNA (552bp) protein (184aa)
carbonic anhydrase
Pro_CA (db=HMMPfam db_id=PF00484 from=44 to=173 evalue=1.3e-09 interpro_id=IPR001765 interpro_description=Carbonic anhydrase GO=Molecular Function: carbonate dehydratase activity (GO:0004089), Molecular Function: zinc ion binding (GO:0008270), Biological Process: carbon utilization (GO:0015976))
beta-carbonic anhydrase, cab (db=superfamily db_id=SSF53056 from=17 to=181 evalue=8.8e-09 interpro_id=IPR001765 interpro_description=Carbonic anhydrase GO=Molecular Function: carbonate dehydratase activity (GO:0004089), Molecular Function: zinc ion binding (GO:0008270), Biological Process: carbon utilization (GO:0015976))
Uncharacterized protein {ECO:0000313|EMBL:EKD92686.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_91_12

Not on your lists

comp(7418..8434)
DNA (1017bp) protein (339aa)
hypothetical protein
seg (db=Seg db_id=seg from=136 to=152)
seg (db=Seg db_id=seg from=319 to=333)
seg (db=Seg db_id=seg from=244 to=256)
ACD28_91_13

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8530..8883
DNA (354bp) protein (118aa)
seg (db=Seg db_id=seg from=64 to=75)
seg (db=Seg db_id=seg from=84 to=96)
Uncharacterized protein {ECO:0000313|EMBL:EKD92688.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_91_14
RBG_13_Deltaproteobacteria_49_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8920..9699)
DNA (780bp) protein (260aa)
hypothetical protein
seg (db=Seg db_id=seg from=161 to=174)
CNF1/YfiH-like putative cysteine hydrolases (db=superfamily db_id=SSF64438 from=2 to=257 evalue=3.8e-42 interpro_id=IPR011324 interpro_description=Cytotoxic necrotizing factor-like, catalytic)
no description (db=Gene3D db_id=G3DSA:3.60.140.10 from=5 to=258 evalue=5.5e-37 interpro_id=IPR003730 interpro_description=Multi-copper polyphenol oxidoreductase, laccase)
ACD28_91_15

Not on your lists

9751..10803
DNA (1053bp) protein (351aa)
Amidohydrolase 2 n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G7I1_9DELT (db=UNIREF evalue=8.0e-28 bit_score=128.0 identity=30.37 coverage=59.8290598290598)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=17 to=36)
ACD28_91_16

Not on your lists

comp(10812..11168)
DNA (357bp) protein (119aa)
coiled-coil (db=Coil db_id=coil from=73 to=94 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKD92676.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_91_17

Not on your lists

11171..11665
DNA (495bp) protein (165aa)
11171..11665 + (rbs_motif=TAA rbs_spacer=12bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD92677.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_91_18

Not on your lists

comp(11716..11805)
DNA (90bp) protein (30aa)
GLUTAMATE SEMIALDEHYDE DEHYDROGENASE (db=HMMPanther db_id=PTHR11063 from=1 to=29 evalue=5.5e-12)
GLUTAMATE SEMIALDEHYDE DEHYDROGENASE (db=HMMPanther db_id=PTHR11063:SF1 from=1 to=29 evalue=5.5e-12 interpro_id=IPR012134 interpro_description=Glutamate-5-semialdehyde dehydrogenase GO=Molecular Function: glutamate-5-semialdehyde dehydrogenase activity (GO:0004350), Biological Process: proline biosynthetic process (GO:0006561), Molecular Function: NADP or NADPH binding (GO:0050661), Biological Process: oxidation reduction (GO:0055114))
Uncharacterized protein {ECO:0000313|EMBL:EKD92678.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
fragment Jill Banfield (11/15/12)
Displaying 18 items

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