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ACD28_87

Alias: ACD28_48184.8010.9

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD28_87_1

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813..1469
DNA (657bp) protein (219aa)
seg (db=Seg db_id=seg from=21 to=34)
Uncharacterized protein {ECO:0000313|EMBL:EKD92953.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_87_2

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1969..2433
DNA (465bp) protein (155aa)
seg (db=Seg db_id=seg from=36 to=45)
seg (db=Seg db_id=seg from=124 to=139)
Uncharacterized protein {ECO:0000313|EMBL:EKD92942.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_87_3

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2554..2814
DNA (261bp) protein (87aa)
2554..2814 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD92943.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_87_4

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3055..3315
DNA (261bp) protein (87aa)
3055..3315 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD92944.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_87_5

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comp(3453..4316)
DNA (864bp) protein (288aa)
Bifunctional protein folD n=1 Tax=Helicobacter canadensis MIT 98-5491 RepID=C5ZVA9_9HELI (db=UNIREF evalue=5.0e-91 bit_score=337.0 identity=58.3 coverage=97.2222222222222)
5,10-methylenetetrahydrofolate dehydrogenase (nadp+) ;methenyltetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9)
THF_DHG_CYH_2 (db=PatternScan db_id=PS00767 from=258 to=266 evalue=0.0 interpro_id=IPR020867 interpro_description=Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: folic acid and derivative biosynthetic process (GO:0009396))
ACD28_87_6

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comp(4553..4975)
DNA (423bp) protein (141aa)
seg (db=Seg db_id=seg from=101 to=113)
Uncharacterized protein {ECO:0000313|EMBL:EKD92946.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_87_7

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comp(4951..5166)
DNA (216bp) protein (72aa)
seg (db=Seg db_id=seg from=49 to=68)
seg (db=Seg db_id=seg from=19 to=35)
Uncharacterized protein {ECO:0000313|EMBL:EKD92947.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_87_8

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comp(5198..5773)
DNA (576bp) protein (192aa)
dTMP kinase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHA0_9EURY (db=UNIREF evalue=8.0e-13 bit_score=76.6 identity=29.17 coverage=80.7291666666667)
thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9] (db=KEGG evalue=2.0e-12 bit_score=75.5 identity=31.25 coverage=64.5833333333333)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=2 to=189 evalue=1.0e-17)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=165 evalue=2.5e-16)
ACD28_87_9
GWA2_PER_44_7, Peregrinibacteria, Bacteria

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5897..6376
DNA (480bp) protein (160aa)
5897..6376 + (rbs_motif=TAA rbs_spacer=11bp)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_87_10
GWA2_PER_44_7, Peregrinibacteria, Bacteria

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comp(6387..6827)
DNA (441bp) protein (147aa)
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
dUTPase-like (db=superfamily db_id=SSF51283 from=6 to=146 evalue=2.8e-35)
no description (db=Gene3D db_id=G3DSA:2.70.40.10 from=6 to=145 evalue=1.5e-32)
DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE (db=HMMPanther db_id=PTHR11241 from=8 to=144 evalue=3.1e-31)
ACD28_87_11
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(6824..7459)
DNA (636bp) protein (212aa)
metallo-beta-lactamase domain-containing protein
Metallo-hydrolase/oxidoreductase (db=superfamily db_id=SSF56281 from=24 to=193 evalue=1.5e-25)
UNCHARACTERIZED (db=HMMPanther db_id=PTHR23200:SF10 from=49 to=211 evalue=1.1e-22)
UNCHARACTERIZED (db=HMMPanther db_id=PTHR23200 from=49 to=211 evalue=1.1e-22)
ACD28_87_12
GWA2_PER_44_7, Peregrinibacteria, Bacteria

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comp(7660..8046)
DNA (387bp) protein (129aa)
Ribosomal protein L1 n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=D6HJ39_9FIRM (db=UNIREF evalue=2.0e-36 bit_score=154.0 identity=56.56 coverage=93.7984496124031)
rplA; 50S ribosomal protein L1
Ribosomal_L1 (db=HMMPfam db_id=PF00687 from=3 to=118 evalue=8.3e-43 interpro_id=IPR002143 interpro_description=Ribosomal protein L1 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396))
50S RIBOSOMAL PROTEIN L1P (db=HMMPanther db_id=PTHR23105:SF5 from=1 to=122 evalue=6.6e-40)
Displaying 12 items

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