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ACD28_37

Alias: ACD28_3549.9471.12

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD28_37_1
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(181..1362)
DNA (1182bp) protein (394aa)
type II secretion system F domain-containing protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=366 to=388)
transmembrane_regions (db=TMHMM db_id=tmhmm from=210 to=232)
transmembrane_regions (db=TMHMM db_id=tmhmm from=159 to=181)
ACD28_37_2
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(1402..1992)
DNA (591bp) protein (197aa)
seg (db=Seg db_id=seg from=13 to=25)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_37_3
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(2015..2524)
DNA (510bp) protein (170aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
coiled-coil (db=Coil db_id=coil from=45 to=66 evalue=NA)
PilN (db=HMMPfam db_id=PF05137 from=19 to=146 evalue=4.4e-06 interpro_id=IPR007813 interpro_description=Fimbrial assembly)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_37_4
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

2589..3011
DNA (423bp) protein (141aa)
hypothetical protein
hypothetical protein alias=ACD28_C00037G00004,ACD28_3549.9471.12G0004,ACD28_3549.9471.12_4 id=31207 tax=ACD28 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_group=PER organism_desc=PER
Putative uncharacterized protein Tax=GWA2_PER_44_7
ACD28_37_5

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3133..3372
DNA (240bp) protein (80aa)
3133..3372 + (rbs_motif=TAA rbs_spacer=11bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD93154.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_37_6

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3430..4761
DNA (1332bp) protein (444aa)
tRNA(Ile)-lysidine synthetase
tRNA(Ile)-lysidine synthetase n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI000185D146 (db=UNIREF evalue=2.0e-53 bit_score=213.0 identity=34.32 coverage=91.6666666666667)
lysidine_TilS_N: tRNA(Ile)-lysidine s (db=HMMTigr db_id=TIGR02432 from=5 to=185 evalue=1.0e-73 interpro_id=IPR012795 interpro_description=Lysidine-tRNA(Ile) synthetase, N-terminal GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tRNA processing (GO:0008033), Molecular Function: ligase activity, forming carbon-nitrogen bonds (GO:0016879))
ATPASES OF THE PP SUPERFAMILY-RELATED (db=HMMPanther db_id=PTHR11807 from=13 to=420 evalue=4.2e-61)
ACD28_37_7

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4859..6730
DNA (1872bp) protein (624aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent metalloprotease FtsH n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CGB2_THET1 (db=UNIREF evalue=2.0e-179 bit_score=633.0 identity=54.49 coverage=95.5128205128205)
transmembrane_regions (db=TMHMM db_id=tmhmm from=125 to=142)
ACD28_37_8
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

6743..7231
DNA (489bp) protein (163aa)
heat-shock protein Hsp20
Small heat shock protein n=3 Tax=candidate division TM7 RepID=UPI00016B2686 (db=UNIREF evalue=8.0e-14 bit_score=79.3 identity=37.0 coverage=59.5092024539877)
seg (db=Seg db_id=seg from=149 to=160)
HSP20-like chaperones (db=superfamily db_id=SSF49764 from=13 to=159 evalue=4.2e-26 interpro_id=IPR008978 interpro_description=HSP20-like chaperone)
ACD28_37_9
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

7234..8100
DNA (867bp) protein (289aa)
UTP-glucose-1-phosphate uridylyltransferase
UTP-glucose-1-phosphate uridylyltransferase
UTP-glucose-1-phosphate uridylyltransferase n=2 Tax=Bacillus megaterium RepID=D5DBK5_BACMD (db=UNIREF evalue=8.0e-81 bit_score=303.0 identity=55.56 coverage=98.6159169550173)
seg (db=Seg db_id=seg from=42 to=56)
ACD28_37_10
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

8231..8821
DNA (591bp) protein (197aa)
TPR repeat
no description (db=Gene3D db_id=G3DSA:1.25.40.10 from=1 to=189 evalue=5.7e-32 interpro_id=IPR011990 interpro_description=Tetratricopeptide-like helical GO=Molecular Function: binding (GO:0005488))
TPR-like (db=superfamily db_id=SSF48452 from=28 to=191 evalue=1.8e-29)
TETRATRICOPEPTIDE REPEAT PROTEIN, TPR (db=HMMPanther db_id=PTHR23083 from=14 to=190 evalue=7.2e-18)
ACD28_37_11
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

8821..8997
DNA (177bp) protein (59aa)
8821..8997 + (rbs_motif=TAA rbs_spacer=9bp)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_37_12
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

8937..9482
DNA (546bp) protein (182aa)
8937..9482 + (rbs_motif=TAA rbs_spacer=9bp)
hypothetical protein Tax=GWA2_PER_44_7
Displaying 12 items

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