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ACD28_160

Alias: ACD28_27668.7961.10

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD28_160_1

Not on your lists

2..202
DNA (201bp) protein (67aa)
seg (db=Seg db_id=seg from=1 to=28)
Uncharacterized protein {ECO:0000313|EMBL:EKD93343.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_160_2
GWA2_PER_44_7, Peregrinibacteria, Bacteria

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comp(237..818)
DNA (582bp) protein (194aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_160_3
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(1005..2210)
DNA (1206bp) protein (402aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=58)
seg (db=Seg db_id=seg from=368 to=377)
coiled-coil (db=Coil db_id=coil from=120 to=141 evalue=NA)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_160_4
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

2624..2860
DNA (237bp) protein (79aa)
2624..2860 + (rbs_motif=TAA rbs_spacer=12bp)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_160_5
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(2894..3460)
DNA (567bp) protein (189aa)
2894..3460 - (rbs_motif=TAA rbs_spacer=12bp)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_160_6
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(3585..3983)
DNA (399bp) protein (133aa)
50S ribosomal protein L12
50S ribosomal protein L7/L12 n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQQ4_9FIRM (db=UNIREF evalue=5.0e-18 bit_score=93.2 identity=64.29 coverage=72.9323308270677)
seg (db=Seg db_id=seg from=42 to=58)
seg (db=Seg db_id=seg from=111 to=128)
ACD28_160_7

Not on your lists


comp(4244..4765)
DNA (522bp) protein (174aa)
rplJ; 50S ribosomal protein L10
Ribosomal_L10 (db=HMMPfam db_id=PF00466 from=5 to=101 evalue=2.0e-22 interpro_id=IPR001790 interpro_description=Ribosomal protein L10 GO=Cellular Component: intracellular (GO:0005622), Biological Process: ribosome biogenesis (GO:0042254))
Ribosomal_L10 (db=HAMAP db_id=MF_00362 from=3 to=161 evalue=22.122)
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_160_8
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(4965..5213)
DNA (249bp) protein (83aa)
seg (db=Seg db_id=seg from=7 to=23)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_160_9
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

5426..6298
DNA (873bp) protein (291aa)
miaA; tRNA dimethylallyltransferase (EC:2.5.1.75)
seg (db=Seg db_id=seg from=120 to=133)
miaA: tRNA delta(2)-isopentenylpyrophosphate (db=HMMTigr db_id=TIGR00174 from=1 to=282 evalue=9.2e-106 interpro_id=IPR018022 interpro_description=tRNA delta(2)-isopentenylpyrophosphate transferase)
TRNA DELTA(2)-ISOPENTENYLPYROPHOSPHATE TRANSFERASE-RELATED (db=HMMPanther db_id=PTHR11088 from=30 to=278 evalue=2.5e-81 interpro_id=IPR002627 interpro_description=tRNA isopentenyltransferase GO=Molecular Function: tRNA isopentenyltransferase activity (GO:0004811), Molecular Function: ATP binding (GO:0005524), Biological Process: tRNA processing (GO:0008033))
ACD28_160_10

Not on your lists

6409..6945
DNA (537bp) protein (179aa)
mazg family protein
seg (db=Seg db_id=seg from=116 to=124)
seg (db=Seg db_id=seg from=134 to=148)
seg (db=Seg db_id=seg from=156 to=168)
ACD28_160_11
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

6953..7999
DNA (1047bp) protein (349aa)
ssDNA-binding protein
seg (db=Seg db_id=seg from=319 to=335)
DHH phosphoesterases (db=superfamily db_id=SSF64182 from=45 to=348 evalue=2.5e-71)
DHH (db=HMMPfam db_id=PF01368 from=65 to=223 evalue=2.3e-15 interpro_id=IPR001667 interpro_description=Phosphoesterase, RecJ-like GO=Molecular Function: hydrolase activity (GO:0016787), Molecular Function: manganese ion binding (GO:0030145))
Displaying 11 items

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