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ACD28_3_4

Organism: ACD28

near complete RP 49 / 55 MC: 12 BSCG 45 / 51 MC: 2 ASCG 0 / 38
Location: comp(2362..3318)

Top 3 Functional Annotations

Value Algorithm Source
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 305.0
  • Bit_score: 233
  • Evalue 6.10e-59
Pseudouridine synthase n=1 Tax=Mollicutes bacterium D7 RepID=C3RK97_9MOLU (db=UNIREF evalue=7.0e-59 bit_score=231.0 identity=41.45 coverage=90.5956112852665) similarity UNIREF
DB: UNIREF
  • Identity: 41.45
  • Coverage: 90.6
  • Bit_score: 231
  • Evalue 7.00e-59
PSI_RLU (db=PatternScan db_id=PS01129 from=142 to=156 evalue=0.0 interpro_id=IPR006224 interpro_description=Pseudouridine synthase, RluC/RluD, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 957
ATGATCTCTGCGCCAACTTCAAAACAATTGGGAAAAATGGATTCCGAAGGAGTCGGTTTTCGATTAGACCGTTGGTTGAGCGATCAGGATCCTTCAAAAAGTCGAAGTGCGTGGCAAAAAAAAATTAAAACGGGAGAAATAAAAGTGAATGGACGGAAGGTTTCTTCTCATTATTCCATGAAAGAAAATGATGTTGTTGAGTATGGTGAAGTCAGTCTCCTCAATAGTATGAAGCCCGATTCGAAATCCACTTTAAAACTCAAGGTACTATTCGAAGACCAGAATTATGCCGTGATCGATAAGCCTGCGGGCTTGGTGGTTCACCCCGGAGCCGGGGTACATAGTGAAACCCTTACGGAAGCGCTTAAAAGTCATTTCAAGGATCAATTGAGCCATATGGGAGGAGTGAATCGTCCCGGGATTGTGCATCGCTTGGATAAAGGTACTTCGGGAATCATGGTTATTGCCAAGAATGATGAAACTCATCGAAATTTGGCGAAACAGTTTGAATCCAAGACCATCATCAAGCTGTATACCGCTTTGGTCGTGGGACATCTGACTCCCAAGCAGGGCTCTATCGAGGCTCCTCTGACACGGAATGAAAAACACCGTCAAAAAATAACCATCAGTACTCATCCTAAAAGTCGTTACGCTCTGACCCATTATGAAGTACTGAGATGGATGGACGTTCCTTGTAAAAGTTCTTTGTTGAAAGTACGCATTGAAACCGGTCGGACCCATCAAATCAGGGTTCATTGTGAAGCTATTGGATACCCCATTGTCGGTGATCCCGTCTATGGTACAAAATCCATCAATCTCCTGGCGAAAGCGCATGGATTAGTACGTCCCTTTCTTCATGCCACCTCCATTGAATTTCTCTCCCCCACCACAGGGAAAAAGGTCCATTACGAGGCTCCCCTTCCGGAAGATTTGAGCAACATAATAGACAAAAACTAG
PROTEIN sequence
Length: 319
MISAPTSKQLGKMDSEGVGFRLDRWLSDQDPSKSRSAWQKKIKTGEIKVNGRKVSSHYSMKENDVVEYGEVSLLNSMKPDSKSTLKLKVLFEDQNYAVIDKPAGLVVHPGAGVHSETLTEALKSHFKDQLSHMGGVNRPGIVHRLDKGTSGIMVIAKNDETHRNLAKQFESKTIIKLYTALVVGHLTPKQGSIEAPLTRNEKHRQKITISTHPKSRYALTHYEVLRWMDVPCKSSLLKVRIETGRTHQIRVHCEAIGYPIVGDPVYGTKSINLLAKAHGLVRPFLHATSIEFLSPTTGKKVHYEAPLPEDLSNIIDKN*