ggKbase home page

ar4r2_scaffold_92

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_92_1
unknown

Not on your lists

3..350
DNA (348bp) protein (116aa)

This feature has no annotations

ar4r2_scaffold_92_2
Bacillus cellulosilyticus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

804..1532
DNA (729bp) protein (243aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=649639 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Ba
Pyruvate formate-lyase 1-activating enzyme n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JJ30_9BACE id=982883 bin=RAAC1_SR1 species=Bacteroides coprocola genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=RAAC1_SR1 organism_group=SR1
Pyruvate formate-lyase 1-activating enzyme
ar4r2_scaffold_92_3
RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

1597..2181
DNA (585bp) protein (195aa)
membrane protein n=1 Tax=Methylomicrobium buryatense RepID=UPI0003451923
hypothetical protein Tax=RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated
hypothetical protein
ar4r2_scaffold_92_4
Pyrococcus horikoshii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

2203..3120
DNA (918bp) protein (306aa)
glyoxylate reductase (EC:1.1.1.26); K00015 glyoxylate reductase [EC:1.1.1.26]
Glyoxylate reductase; EC=1.1.1.26;; TaxID=70601 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /; NBRC 100139 / OT-3).;"
Glyoxylate reductase n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=GYAR_PYRHO
ar4r2_scaffold_92_5
RLO_OD1_Nomurabacteria_44_11, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3179..3595
DNA (417bp) protein (139aa)
hypothetical protein
Cell growth inhibitor/plasmid maintenance toxic component 27..134 id=983508 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_44_11_curated
ar4r2_scaffold_92_6
Methanotorris igneus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

3706..5895
DNA (2190bp) protein (730aa)
Acetyl coenzyme A synthetase (ADP forming), alpha domain protein n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BDD3_METIK
acetyl coenzyme A synthetase alpha domain-containing protein
Acetyl coenzyme A synthetase (ADP forming), alpha domain protein {ECO:0000313|EMBL:AEF96494.1}; TaxID=880724 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Meth
ar4r2_scaffold_92_7
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(5929..6822)
DNA (894bp) protein (298aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] id=68898 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=ACD49
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
ar4r2_scaffold_92_8
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(6849..7226)
DNA (378bp) protein (126aa)
Hypothetical conserved protein n=1 Tax=uncultured prokaryote RepID=H5SPY8_9ZZZZ
type II restriction endonuclease
Uncharacterized protein {ECO:0000313|EMBL:ACC84045.1}; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc punctiforme (strain ATCC 29133 / PCC 73102).;"
ar4r2_scaffold_92_9
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(7373..8506)
DNA (1134bp) protein (378aa)
kol:Kole_0487 malate dehydrogenase (oxaloacetate-decarboxylating) (EC:1.1.1.38); K00027 malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] Tax=ACD49
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FVV6_9BACT rbh
malic enzyme
ar4r2_scaffold_92_10
Deferribacter desulfuricans, Deferribacter, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

comp(8550..10166)
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PDR3_DEFDS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI80736.1}; TaxID=639282 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae; Deferribacter.;" source="Deferribacter desulfuricans (str
ar4r2_scaffold_92_11
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(10275..13991)
DNA (3717bp) protein (1239aa)
Carboxyl-terminal protease, carboxyl-terminal processing protease {ECO:0000313|EMBL:KKR05348.1}; EC=3.4.21.102 {ECO:0000313|EMBL:KKR05348.1};; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" sou
ar4r2_scaffold_92_12

Not on your lists

comp(14247..15326)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BCN0_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD66533.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Type II secretion system protein
ar4r2_scaffold_92_13
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(15359..16624)
DNA (1266bp) protein (422aa)
pth:PTH_1145 pulE; type II secretory pathway, ATPase PulE/tfp pilus assembly pathway, ATPase PilB; K02652 type IV pilus assembly protein PilB id=69430 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
pth:PTH_1145 pulE; type II secretory pathway, ATPase PulE/tfp pilus assembly pathway, ATPase PilB; K02652 type IV pilus assembly protein PilB Tax=ACD49
hypothetical protein
ar4r2_scaffold_92_14
unknown

Not on your lists

comp(16635..17966)
DNA (1332bp) protein (444aa)

This feature has no annotations

ar4r2_scaffold_92_15
unknown

Not on your lists

comp(17976..18809)
DNA (834bp) protein (278aa)

This feature has no annotations

ar4r2_scaffold_92_16
ACD78, Gracilibacteria, Bacteria

Not on your lists

comp(18886..21528)
DNA (2643bp) protein (881aa)
sti:Sthe_1001 exonuclease RNase T and DNA polymerase III; K03722 ATP-dependent DNA helicase DinG [EC:3.6.1.-] id=124858 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
sti:Sthe_1001 exonuclease RNase T and DNA polymerase III; K03722 ATP-dependent DNA helicase DinG [EC:3.6.1.-] Tax=ACD78
DnaQ family exonuclease/DinG family helicase, putative
ar4r2_scaffold_92_17
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(21747..24797)
DNA (3051bp) protein (1017aa)
HsdR family type I site-specific deoxyribonuclease (EC:3.1.21.3); K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] id=5050687 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
HsdR family type I site-specific deoxyribonuclease (EC:3.1.21.3); K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] Tax=AR18
HsdR family type I site-specific deoxyribonuclease (EC:3.1.21.3)
ar4r2_scaffold_92_18
GWA2_OP11_ACD12_33_33, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(24981..25580)
DNA (600bp) protein (200aa)
Transposase n=1 Tax=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) RepID=B0TY31_FRAP2
Uncharacterized protein {ECO:0000313|EMBL:KKP51719.1}; TaxID=1618476 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_33_33.;"
transposase IS200 like family protein
ar4r2_scaffold_92_19
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25728..26870)
DNA (1143bp) protein (381aa)
restriction modification system DNA specificity domain-containing protein; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3] id=5050689 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC18319.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas la
restriction modification system DNA specificity domain-containing protein
ar4r2_scaffold_92_20
RIFOXYB1_FULL_OP11_Woesebacteria_38_16_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(26892..27941)
DNA (1050bp) protein (350aa)
toxin Fic n=1 Tax=Treponema primitia RepID=UPI00025553C8 rbh
cytoplasmic protein Tax=RIFOXYB1_FULL_OP11_Woesebacteria_38_16_curated
cytoplasmic protein
ar4r2_scaffold_92_21
RifOxyC12_full_OD1_Magasanikbacteria_33_11_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(27966..29516)
DNA (1551bp) protein (517aa)
type I restriction-modification system subunit M (EC:2.1.1.72); K03427 type I restriction enzyme M protein [EC:2.1.1.72] Tax=RifOxyC12_full_OD1_Magasanikbacteria_33_11_curated
Type I restriction-modification system, M subunit n=1 Tax=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) RepID=A6UNC1_METVS
type I restriction-modification system, M subunit
ar4r2_scaffold_92_trna_2
unknown

Not on your lists

comp(29697..29769)
DNA (73bp)
transferRNA
ar4r2_scaffold_92_22
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

29936..30442
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EYN9_EMTOG
Uncharacterized protein; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
DivIVA domain-containing protein
ar4r2_scaffold_92_23
CG_Falkow_03, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(30443..32044)
DNA (1602bp) protein (534aa)
FAD dependent oxidoreductase; K07137 Tax=CG_Falkow_03
FAD dependent oxidoreductase id=2076234 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria) rbh
FAD-dependent dehydrogenase domain-containing protein
ar4r2_scaffold_92_24
ACD4, Gracilibacteria, Bacteria

Not on your lists

32205..32672
DNA (468bp) protein (156aa)
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F5A5_9BACT
Tax=ACD4
ar4r2_scaffold_92_25
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

32774..33829
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G7P1_9BACT
hypothetical protein Tax=CG_GN02-02
hypothetical protein
ar4r2_scaffold_92_26
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(33856..34389)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AD25_9BACT
transmembrane_regions 29..51 Tax=ACD49
ar4r2_scaffold_92_27
ACD49, ACD49, ACD49, ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(34412..34990)
DNA (579bp) protein (193aa)
Actin-like ATPase domain id=69116 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Actin-like ATPase domain id=69116 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
hypothetical protein
ar4r2_scaffold_92_28
ACD2, Gracilibacteria, Bacteria

Not on your lists

35141..35863
DNA (723bp) protein (241aa)
lepB; signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=ACD2
Signal peptidase I n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FFQ2_9BACT
ar4r2_scaffold_92_29
ACD49, Gracilibacteria, Bacteria

Not on your lists

35959..36735
DNA (777bp) protein (259aa)
tRNA pseudouridine synthase B; K03177 tRNA pseudouridine synthase B [EC:5.4.99.12] Tax=ACD49
tRNA pseudouridine synthase B n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F719_9BACT
tRNA pseudouridine synthase B
Displaying items 1-30 of 66 in total

View Taxonomy