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ar4r2_scaffold_879

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_879_1

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221..1288
DNA (1068bp) protein (356aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GSE5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKN60840.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ar4r2_scaffold_879_2
ACD3, Gracilibacteria, Bacteria

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1291..1959
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XZ56_9BACT
ABC-type transport system involved in Fe-S cluster assembly permease component; K07033 Tax=ACD3
sufD; cysteine desulfurase activator complex subunit SufD
ar4r2_scaffold_879_3
unknown

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2111..2866
DNA (756bp) protein (252aa)

This feature has no annotations

ar4r2_scaffold_879_4
unknown

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2919..3164
DNA (246bp) protein (82aa)

This feature has no annotations

ar4r2_scaffold_879_5
Candidatus Magnetobacterium bavaricum, Candidatus Magnetobacterium, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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3174..3620
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7C5Q4_9GAMM
Twitching motilty protein PilT {ECO:0000313|EMBL:KJU85332.1}; TaxID=29290 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetobacterium.;" source="Candidatus Magnetobacter
ar4r2_scaffold_879_6
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

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3640..5319
DNA (1680bp) protein (560aa)
proS; prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] id=15188580 bin=GWF2_WS6 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=GWF2_WS6 organism_group=WS6 (Doikabacteria) organism_desc=Complete genome
Prolyl-tRNA synthetase {ECO:0000313|EMBL:KKQ23144.1}; TaxID=1618483 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC1_37_12.;"
prolyl-tRNA synthetase
ar4r2_scaffold_879_7
ACD78, Gracilibacteria, Bacteria

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comp(5368..5568)
DNA (201bp) protein (67aa)
hypothetical protein id=124005 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
hypothetical protein Tax=ACD78
ar4r2_scaffold_879_8
ACD4, Gracilibacteria, Bacteria

Not on your lists

5694..6044
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FY27_9BACT
RBFA 10..101 Tax=ACD4
ar4r2_scaffold_879_9
CG_GN02-02, Gracilibacteria, Bacteria

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6056..7009
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G3F7_9BACT
Uncharacterized protein Tax=CG_GN02-02
ar4r2_scaffold_879_10
unknown

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comp(7023..8387)
DNA (1365bp) protein (455aa)

This feature has no annotations

ar4r2_scaffold_879_11
unknown

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comp(8391..9644)
DNA (1254bp) protein (418aa)

This feature has no annotations

ar4r2_scaffold_879_12
RIFOXYB2_FULL_Peregrinibacteria_32_7_curated, Peregrinibacteria, Bacteria

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comp(9646..10296)
DNA (651bp) protein (217aa)
trmD; tRNA (guanine-n(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFOXYB2_FULL_Peregrinibacteria_32_7_curated
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAP9_9CLOT id=69223 bin=ACD49 species=[Clostridium] bartlettii genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
trmD; tRNA (Guanine-n(1)-)-methyltransferase
ar4r2_scaffold_879_13
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(10304..12052)
DNA (1749bp) protein (583aa)
glycosyl transferase family 4 id=50351 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
glycosyl transferase family 4 Tax=ACD3
UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase
ar4r2_scaffold_879_14
unknown

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comp(12063..12746)
DNA (684bp) protein (228aa)

This feature has no annotations

ar4r2_scaffold_879_15
RIFOXYB1_FULL_RIF_OD1_07_40_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

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comp(12757..13608)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XWD2_9BACT
cytosolic 5'-nucleotidase 3-like Tax=RIFOXYB1_FULL_RIF_OD1_07_40_15_curated
pco072227; LOC100284093
ar4r2_scaffold_879_16
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13692..14549)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BUT1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EQK40479.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermen
hypothetical protein
ar4r2_scaffold_879_17
unknown

Not on your lists

comp(14626..14907)
DNA (282bp) protein (94aa)

This feature has no annotations

ar4r2_scaffold_879_18
ACD49, Gracilibacteria, Bacteria

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comp(14940..15182)
DNA (243bp) protein (81aa)
coiled-coil 39..67 Tax=ACD49
ar4r2_scaffold_879_19
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(15265..16605)
DNA (1341bp) protein (447aa)
General secretion pathway protein E n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FVN9_9BACT rbh
aae:aq_1971 tapB; type IV pilus assembly protein TapB; K02652 type IV pilus assembly protein PilB Tax=ACD49
pilB1; type IV-A pilus assembly ATPase PilB
ar4r2_scaffold_879_20
Leptotrichia wadei, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

16743..17438
DNA (696bp) protein (232aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=888055 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" s
ribosomal small subunit pseudouridine synthase A n=2 Tax=Fusobacterium RepID=UPI0001BC42E2 id=132400 bin=ACD80 species=unknown genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=ACD80 organism_group=SR1
hypothetical protein
ar4r2_scaffold_879_21
Leptotrichia sp. oral taxon 215, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

17454..18473
DNA (1020bp) protein (340aa)
S-adenosylmethionine/tRNA-ribosyltransferase-iso merase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] id=34514 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase
ar4r2_scaffold_879_22
ACD49, Gracilibacteria, Bacteria

Not on your lists

18497..21346
DNA (2850bp) protein (950aa)
bss:BSUW23_17230 uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A id=35059 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
gka:GK3085 uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A Tax=ACD49
uvrA; excinuclease ABC subunit A
ar4r2_scaffold_879_23
Thiorhodospira sibirica, Thiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21408..22076)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8YXQ4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGZ50655.1}; TaxID=765914 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thiorhodospira.;" source="Thiorhodospi
ar4r2_scaffold_879_24

Not on your lists

comp(22213..23115)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G1N5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE28933.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Displaying 24 items

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