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cg2_3.0_scaffold_5890_c

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_5890_c_1
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

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comp(1..990)
DNA (990bp) protein (330aa)
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] id=5803372 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
tRNA-specific 2-thiouridylase MnmA Tax=CG_Nomura_02
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
cg2_3.0_scaffold_5890_c_2
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(1107..2135)
DNA (1029bp) protein (343aa)
hypothetical protein Tax=CG_Nomura_02
aminodeoxychorismate lyase; K07082 UPF0755 protein id=5803534 bin=OD1_GWC2_34_28 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
aminodeoxychorismate lyase
cg2_3.0_scaffold_5890_c_3
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(2141..3376)
DNA (1236bp) protein (412aa)
transmembrane_regions Tax=CG_Nomura_02
transmembrane_regions id=5803535 bin=OD1_GWC2_34_28 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
cg2_3.0_scaffold_5890_c_4
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

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comp(3512..4540)
DNA (1029bp) protein (343aa)
hypothetical protein Tax=CG_Nomura_02
coiled-coil id=5227114 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) rbh
hypothetical protein
cg2_3.0_scaffold_5890_c_5
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(4628..7024)
DNA (2397bp) protein (799aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=CG_Nomura_02
ssm:Spirs_0283 leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] id=84436 bin=ACD56 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=ACD56 organism_group=OD1-i organism_desc=OD1-i rbh
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
cg2_3.0_scaffold_5890_c_6
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(7093..8061)
DNA (969bp) protein (323aa)
Putative uncharacterized protein n=1 Tax=Citreicella sp. SE45 RepID=D0DB09_9RHOB id=13944 bin=ACD18 species=Citreicella sp. SE45 genus=Citreicella taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1 rbh
hypothetical protein Tax=CG_Nomura_02
hypothetical protein
cg2_3.0_scaffold_5890_c_7
R_RIF_OD1_09_43_27, RIF-OD1-9, Parcubacteria, Bacteria

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8264..9073
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Nitratiruptor sp. (strain SB155-2) RepID=A6Q1L4_NITSB rbh
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_43_27_curated
hypothetical protein
cg2_3.0_scaffold_5890_c_8
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

9248..9676
DNA (429bp) protein (143aa)
CheY-like Tax=CG_Nomura_02
CheY-like id=133077 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1 rbh
cg2_3.0_scaffold_5890_c_9
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

9679..10437
DNA (759bp) protein (253aa)
putative ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein Tax=CG_Nomura_02
ABC-type antimicrobial peptide transport system, ATPase component id=15190629 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete rbh
putative ABC transporter ATP-binding protein
cg2_3.0_scaffold_5890_c_10
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

10456..10950
DNA (495bp) protein (165aa)
ABC-type antimicrobial peptide transport system, ATPase component Tax=CG_Nomura_02
ABC-type antimicrobial peptide transport system, ATPase component id=15190629 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Displaying 10 items

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