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cg2_3.0_scaffold_1142_c

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_1142_c_1

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comp(3..260)
DNA (258bp) protein (86aa)
Recombinase {ECO:0000313|EMBL:KKU78060.1}; TaxID=1618845 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_64.;"
cg2_3.0_scaffold_1142_c_2
RIFOXYB1_FULL_RIF_OD1_07_40_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

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comp(625..1374)
DNA (750bp) protein (250aa)
Tax=RIFOXYB1_FULL_RIF_OD1_07_40_15_curated
cg2_3.0_scaffold_1142_c_3
CG_CPR12_01, CG_CPR12, Bacteria

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comp(2128..2877)
DNA (750bp) protein (250aa)
putative lipoprotein Tax=CG_CPR12_01
hypothetical protein id=5801815 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A rbh
DSBA oxidoreductase
cg2_3.0_scaffold_1142_c_trna_1
unknown

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comp(3036..3107)
DNA (72bp)
transferRNA
cg2_3.0_scaffold_1142_c_4
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists


3114..4193
DNA (1080bp) protein (360aa)
putative DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=CG_CPR12_01
glycoprotease family metalloendopeptidase (EC:3.4.24.57)
cg2_3.0_scaffold_1142_c_5
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

4190..4636
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N3I5_9BACT id=87236 bin=ACD58 species=Victivallis vadensis genus=Victivallis taxon_order=unknown taxon_class=Lentisphaeria phylum=Lentisphaerae tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58 rbh
ATPase or kinase; K06925 UPF0079 ATP-binding protein Tax=CG_CPR12_01
ATPase or kinase
cg2_3.0_scaffold_1142_c_6
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(4711..6411)
DNA (1701bp) protein (567aa)
GspE; pili biogenesis protein PilB-like ATPase; K02652 type IV pilus assembly protein PilB Tax=CG_CPR12_01
GspE; pili biogenesis protein PilB-like ATPase
cg2_3.0_scaffold_1142_c_7
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(6434..7438)
DNA (1005bp) protein (335aa)
Tax=CG_CPR12_01
cg2_3.0_scaffold_1142_c_8
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(7606..9069)
DNA (1464bp) protein (488aa)
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:6.3.5.-); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=CG_CPR12_01
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:6.3.5.-)
cg2_3.0_scaffold_1142_c_9
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(9076..9369)
DNA (294bp) protein (98aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.-); K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] Tax=CG_CPR12_01
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=uncultured bacterium RepID=K2EHL6_9BACT rbh
cg2_3.0_scaffold_1142_c_10
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(9413..11461)
DNA (2049bp) protein (683aa)
DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=CG_CPR12_01
hypothetical protein id=5801436 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A rbh
DNA ligase
cg2_3.0_scaffold_1142_c_11
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(11560..12312)
DNA (753bp) protein (251aa)
Tax=CG_CPR12_01
cg2_3.0_scaffold_1142_c_12
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(12382..20226)
DNA (7845bp) protein (2615aa)
Tax=CG_CPR12_01
cg2_3.0_scaffold_1142_c_13
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

20582..21115
DNA (534bp) protein (178aa)
Tax=CG_CPR12_01
cg2_3.0_scaffold_1142_c_14
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(21165..21818)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B76AA9 rbh
hypothetical protein Tax=CG_CPR12_01
cg2_3.0_scaffold_1142_c_15
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(21830..22567)
DNA (738bp) protein (246aa)
transmembrane_regions Tax=CG_CPR12_01
transmembrane_regions id=5801439 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A rbh
cg2_3.0_scaffold_1142_c_16
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(22571..23248)
DNA (678bp) protein (226aa)
transmembrane_regions Tax=CG_CPR12_01
cg2_3.0_scaffold_1142_c_17
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(23337..24140)
DNA (804bp) protein (268aa)
Peptidase A24 N-terminal domain family; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=CG_CPR12_01
peptidase A24 N-terminal domain family protein
cg2_3.0_scaffold_1142_c_18
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(24369..24872)
DNA (504bp) protein (168aa)
putative General secretion pathway protein GspG Tax=CG_CPR12_01
hypothetical protein id=5801442 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A rbh
hypothetical protein
cg2_3.0_scaffold_1142_c_19
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(25154..26362)
DNA (1209bp) protein (403aa)
Tfp pilus biogenesis protein PilC; K02653 type IV pilus assembly protein PilC Tax=CG_CPR12_01
hypothetical protein id=5801443 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A rbh
Tfp pilus biogenesis protein PilC
cg2_3.0_scaffold_1142_c_20
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(26401..27474)
DNA (1074bp) protein (358aa)
twitching motility protein; K02669 twitching motility protein PilT Tax=CG_CPR12_01
hypothetical protein id=5801444 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A rbh
twitching motility protein
cg2_3.0_scaffold_1142_c_21
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(27551..27940)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZF88_9BACT rbh
hypothetical protein Tax=CG_CPR12_01
PAS/PAC sensor hybrid histidine kinase
cg2_3.0_scaffold_1142_c_22
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(28032..29774)
DNA (1743bp) protein (581aa)
type IV pilus assembly protein PilB; K02652 type IV pilus assembly protein PilB Tax=CG_CPR12_01
hypothetical protein id=5801446 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A rbh
type IV pilus assembly protein PilB
cg2_3.0_scaffold_1142_c_23
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(29776..30789)
DNA (1014bp) protein (338aa)
putative amylopullulanase (EC:3.2.1.1 3.2.1.41)
PA14 domain-containing protein Tax=CG_CPR12_01
cg2_3.0_scaffold_1142_c_24
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(30801..31505)
DNA (705bp) protein (235aa)
Tax=CG_CPR12_01
cg2_3.0_scaffold_1142_c_25
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(31516..33363)
DNA (1848bp) protein (616aa)
transmembrane_regions 72..94 Tax=CG_CPR12_01
transmembrane_regions 72..94 id=53716 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1 rbh
cg2_3.0_scaffold_1142_c_26
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(33382..34821)
DNA (1440bp) protein (480aa)
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=CG_CPR12_01
type IV pilus biogenesis protein PilM; K02662 type IV pilus assembly protein PilM id=56453 bin=ACD43 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=ACD43 organism_group=OD1 (Parcubacteria) organism_desc=OD1 rbh
type IV pilus assembly protein PilM
cg2_3.0_scaffold_1142_c_27
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

34941..35498
DNA (558bp) protein (186aa)
LemA-like protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B255F id=130556 bin=ACD7 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD7 organism_group=OD1-i organism_desc=OD1-i rbh
LemA family protein; K03744 LemA protein Tax=CG_CPR12_01
LemA family protein
cg2_3.0_scaffold_1142_c_28
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

35523..36407
DNA (885bp) protein (295aa)
htpX; membrane protease (EC:3.4.24.-) Tax=CG_CPR12_01
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI000365932E rbh
hypothetical protein
cg2_3.0_scaffold_1142_c_29
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

36442..37677
DNA (1236bp) protein (412aa)
id=1889167 Tax=CG_CPR12_01
Displaying items 1-30 of 33 in total

View Taxonomy