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cg_3.0_sub10_scaffold_316_c

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_3.0_sub10_scaffold_316_c_1
R_RIF_OD1_03_53_11, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

comp(2..247)
DNA (246bp) protein (82aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_03_53_11_curated
cg_3.0_sub10_scaffold_316_c_2
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

426..1685
DNA (1260bp) protein (420aa)
enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] Tax=CG_Moran_02
enolase (EC:4.2.1.11)
Enolase n=1 Tax=Thermotoga thermarum DSM 5069 RepID=F7YXU7_9THEM rbh
cg_3.0_sub10_scaffold_316_c_3
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(1809..2726)
DNA (918bp) protein (306aa)
transmembrane_regions 7..29 Tax=CG_Moran_02
transmembrane_regions 7..29 id=17005 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i rbh
cg_3.0_sub10_scaffold_316_c_4
unknown

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comp(2767..2868)
DNA (102bp) protein (34aa)

This feature has no annotations

cg_3.0_sub10_scaffold_316_c_5
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

2908..3438
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YK62_9BACT rbh
blue (type 1) copper domain-containing protein Tax=CG_Moran_02
blue (type 1) copper domain-containing protein
cg_3.0_sub10_scaffold_316_c_6
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3478..6891)
DNA (3414bp) protein (1138aa)
putative multidrug resistance protein Tax=CG_Moran_02
chu:CHU_2513 acrD; cation/multidrug efflux pump id=16820 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i rbh
putative multidrug resistance protein
cg_3.0_sub10_scaffold_316_c_7
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(6896..8005)
DNA (1110bp) protein (370aa)
RND family efflux system membrane fusion protein n=1 Tax=uncultured bacterium RepID=K2F880_9BACT rbh
RND family efflux transporter, MFP subunit Tax=CG_Moran_02
RND family efflux transporter, MFP subunit
cg_3.0_sub10_scaffold_316_c_8
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(8017..8484)
DNA (468bp) protein (156aa)
"Winged helix" DNA-binding domain Tax=CG_Moran_02
"Winged helix" DNA-binding domain id=137872 bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i rbh
cg_3.0_sub10_scaffold_316_c_9
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

8927..9484
DNA (558bp) protein (186aa)
RNA polymerase sigma factor sigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CG_Moran_02
RNA polymerase subunit sigma-24
cg_3.0_sub10_scaffold_316_c_10
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

9509..9910
DNA (402bp) protein (134aa)
seg 47..59 Tax=CG_Moran_02
seg 47..59 id=16813 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i rbh
cg_3.0_sub10_scaffold_316_c_11
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

9929..10456
DNA (528bp) protein (176aa)
transmembrane_regions 13..35 Tax=CG_Moran_02
transmembrane_regions 13..35 id=88282 bin=ACD5 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=ACD5 organism_group=OD1-i organism_desc=OD1-i rbh
cg_3.0_sub10_scaffold_316_c_12
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

10469..11581
DNA (1113bp) protein (371aa)
Putative ABC export system, membrane fusion protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CN04_9ACTN id=83888 bin=ACD56 species=Atopobium rimae genus=Atopobium taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD56 organism_group=OD1-i organism_desc=OD1-i rbh
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein Tax=CG_Moran_02
AcrA; membrane-fusion protein
cg_3.0_sub10_scaffold_316_c_13
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

11614..12300
DNA (687bp) protein (229aa)
Macrolide export ATP-binding/permease protein MacB n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CN03_9ACTN id=83887 bin=ACD56 species=Atopobium rimae genus=Atopobium taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD56 organism_group=OD1-i organism_desc=OD1-i rbh
ABC transporter Tax=CG_Moran_02
ABC transporter
cg_3.0_sub10_scaffold_316_c_14
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

12322..13542
DNA (1221bp) protein (407aa)
hypothetical protein Tax=CG_Moran_02
hypothetical protein id=83886 bin=ACD56 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=ACD56 organism_group=OD1-i organism_desc=OD1-i rbh
multidrug ABC transporter substrate-binding protein
cg_3.0_sub10_scaffold_316_c_15
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

13678..14088
DNA (411bp) protein (137aa)
Tax=CG_Moran_02
cg_3.0_sub10_scaffold_316_c_16
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

14098..14565
DNA (468bp) protein (156aa)
Tax=CG_Moran_02
cg_3.0_sub10_scaffold_316_c_17
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

14519..15466
DNA (948bp) protein (316aa)
ApbE family lipoprotein Tax=CG_Moran_02
ApbE family lipoprotein; K03734 thiamine biosynthesis lipoprotein id=137680 bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i rbh
ApbE family lipoprotein
cg_3.0_sub10_scaffold_316_c_18
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

15450..16415
DNA (966bp) protein (322aa)
hypothetical protein Tax=CG_Moran_02
hypothetical protein id=137966 bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i rbh
hypothetical protein
cg_3.0_sub10_scaffold_316_c_19

Not on your lists

comp(16372..16629)
DNA (258bp) protein (86aa)
transposase id=8311 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
Transposase {ECO:0000313|EMBL:EKE11122.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Transposase, IS30 family
Displaying 19 items

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