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cg_3.0_sub10_scaffold_1218_c

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_3.0_sub10_scaffold_1218_c_1
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

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2..919
DNA (918bp) protein (306aa)
Radical SAM domain protein n=1 Tax=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) RepID=A8MCE4_CALMQ rbh
radical SAM domain-containing protein
Tax=CG_Moran_02
cg_3.0_sub10_scaffold_1218_c_2
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

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1177..1773
DNA (597bp) protein (199aa)
Tax=CG_Moran_02
cg_3.0_sub10_scaffold_1218_c_3
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

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1894..2598
DNA (705bp) protein (235aa)
Tax=CG_Moran_02
cg_3.0_sub10_scaffold_1218_c_4
unknown

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2720..3160
DNA (441bp) protein (147aa)

This feature has no annotations

cg_3.0_sub10_scaffold_1218_c_5
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

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3475..4020
DNA (546bp) protein (182aa)
Putative histidine kinase with two PAS domains and one PAS 4 domain (EC:2.7.13.3)
transcriptional regulator n=1 Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B6D7EB rbh
PAS/PAC sensor signal transduction histidine kinase Tax=CG_Moran_02
cg_3.0_sub10_scaffold_1218_c_6
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

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4101..5153
DNA (1053bp) protein (351aa)
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC:5.-.-.-); K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] Tax=CG_Moran_02
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] id=15190397 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete rbh
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
cg_3.0_sub10_scaffold_1218_c_trna_1
unknown

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comp(5155..5226)
DNA (72bp)
transferRNA
cg_3.0_sub10_scaffold_1218_c_7
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

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comp(5238..6887)
DNA (1650bp) protein (550aa)
DNA polymerase III subunits gamma and tau; K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] Tax=CG_Moran_02
has:Halsa_0336 DNA polymerase III, subunits gamma and tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] id=136487 bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i rbh
DNA polymerase III subunit gamma/tau
cg_3.0_sub10_scaffold_1218_c_8
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

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comp(7098..7553)
DNA (456bp) protein (152aa)
family 2 glycosyl transferase Tax=CG_Moran_02
glycosyl transferase family 2 id=88797 bin=ACD5 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=ACD5 organism_group=OD1-i organism_desc=OD1-i rbh
family 2 glycosyl transferase
cg_3.0_sub10_scaffold_1218_c_9
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists


comp(7562..8338)
DNA (777bp) protein (259aa)
50S ribosomal protein L7/L12 n=1 Tax=uncultured bacterium RepID=K2F3Y9_9BACT rbh
hypothetical protein Tax=CG_Moran_02
50S ribosomal protein L7/L12
cg_3.0_sub10_scaffold_1218_c_10
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(8335..8550)
DNA (216bp) protein (72aa)
Tax=CG_Moran_02
cg_3.0_sub10_scaffold_1218_c_11

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comp(8559..8816)
DNA (258bp) protein (86aa)
transposase id=8311 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
Transposase {ECO:0000313|EMBL:EKE11122.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Transposase, IS30 family
Displaying 12 items

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