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cg2_3.0_scaffold_3865_c

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_3865_c_1
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(297..1136)
DNA (840bp) protein (280aa)
transmembrane_regions 15..37 Tax=CG_GN02-01
transmembrane_regions 15..37 id=124130 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg2_3.0_scaffold_3865_c_2
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(1257..1667)
DNA (411bp) protein (137aa)
DNA polymerase I (EC:2.7.7.7); K02335 DNA polymerase I [EC:2.7.7.7] Tax=CG_GN02-01
sat:SYN_02261 DNA polymerase I (EC:2.7.7.7); K02335 DNA polymerase I [EC:2.7.7.7] id=69425 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
DNA polymerase I (EC:2.7.7.7)
cg2_3.0_scaffold_3865_c_3
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(1854..2114)
DNA (261bp) protein (87aa)
cts:Ctha_2636 DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7] Tax=ACD4
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FV19_9BACT
DNA polymerase I
cg2_3.0_scaffold_3865_c_4
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(2259..2663)
DNA (405bp) protein (135aa)
polA; DNA polymerase I (EC:2.7.7.7) Tax=CG_GN02-01
polA; DNA polymerase I (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GYC9_9BACT
cg2_3.0_scaffold_3865_c_5
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(2796..3728)
DNA (933bp) protein (311aa)
transmembrane_regions 59..81 Tax=CG_GN02-01
transmembrane_regions 59..81 id=123661 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg2_3.0_scaffold_3865_c_6
ACD78, Gracilibacteria, Bacteria

Not on your lists

comp(4113..4274)
DNA (162bp) protein (54aa)
transmembrane_regions 59..81 id=123661 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
transmembrane_regions 59..81 Tax=ACD78
cg2_3.0_scaffold_3865_c_7
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(4343..4843)
DNA (501bp) protein (167aa)
rRNA methylase Tax=CG_GN02-01
tRNA/rRNA methyltransferase (SpoU) id=123662 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
rRNA methylase
cg2_3.0_scaffold_3865_c_8
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

4867..5118
DNA (252bp) protein (84aa)
Tax=CG_GN02-01
cg2_3.0_scaffold_3865_c_9

Not on your lists

comp(5511..5636)
DNA (126bp) protein (42aa)
Chaperone protein dnaJ n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YDX4_9BACT
Chaperone protein dnaJ {ECO:0000313|EMBL:EKD30458.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
cg2_3.0_scaffold_3865_c_10
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(5642..5869)
DNA (228bp) protein (76aa)
Tax=CG_GN02-01
cg2_3.0_scaffold_3865_c_11
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(5973..6089)
DNA (117bp) protein (39aa)
similar to DnaJ (Hsp40) homolog subfamily B member 5; K09511 DnaJ homolog subfamily B member 5 Tax=CG_GN02-01
dnaJ; heat shock protein; K05516 curved DNA-binding protein id=123666 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
molecular chaperone DnaJ
cg2_3.0_scaffold_3865_c_12
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(6104..6307)
DNA (204bp) protein (68aa)
seg 7..15 Tax=CG_GN02-01
seg 7..15 id=123632 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg2_3.0_scaffold_3865_c_13
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(6335..6640)
DNA (306bp) protein (102aa)
leuS; leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=CG_GN02-01
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XHZ6_9BACT
leuS; leucyl-tRNA synthetase
cg2_3.0_scaffold_3865_c_14
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(6692..7597)
DNA (906bp) protein (302aa)
leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=CG_GN02-01
Leucine--tRNA ligase id=1266888 bin=GWE1_Spirochaetes_32_154 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE1_Spirochaetes_32_154 organism_group=Spirochaetes
leucyl-tRNA synthetase
cg2_3.0_scaffold_3865_c_15
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(7853..8971)
DNA (1119bp) protein (373aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4) Tax=CG_GN02-01
tde:TDE2339 leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] id=124253 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
cg2_3.0_scaffold_3865_c_16
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(9097..9453)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YD60_9BACT
Uncharacterized protein Tax=CG_GN02-01
cg2_3.0_scaffold_3865_c_17
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists


comp(9555..9842)
DNA (288bp) protein (96aa)
30S ribosomal protein S18 Tax=CG_GN02-01
SSU ribosomal protein S18p; K02963 small subunit ribosomal protein S18 id=124252 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
rpsR; 30S ribosomal protein S18
cg2_3.0_scaffold_3865_c_18
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(9868..10278)
DNA (411bp) protein (137aa)
single-strand binding protein; K03111 single-strand DNA-binding protein Tax=CG_GN02-01
single-strand binding protein; K03111 single-strand DNA-binding protein id=124249 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
single-strand binding protein
cg2_3.0_scaffold_3865_c_19
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists


comp(10425..10718)
DNA (294bp) protein (98aa)
30S ribosomal protein S6 n=2 Tax=Fusobacterium RepID=C6JHZ5_FUSVA id=124244 bin=ACD78 species=unknown genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 Tax=CG_GN02-01
rpsF; 30S ribosomal protein S6
cg2_3.0_scaffold_3865_c_20
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

10974..11183
DNA (210bp) protein (70aa)
Two component transcriptional regulator, winged helix family n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YXS5_9BACT
colR; two-component system regulatory protein Tax=CG_GN02-01
transcriptional regulator
cg2_3.0_scaffold_3865_c_21
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

11370..11615
DNA (246bp) protein (82aa)
winged helix family two component transcriptional regulator Tax=CG_GN02-01
two component transcriptional regulator, winged helix family id=124251 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
transcriptional regulator
cg2_3.0_scaffold_3865_c_22
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

11648..11872
DNA (225bp) protein (75aa)
resE; signal transduction histidine kinase Tax=CG_GN02-01
resE; signal transduction histidine kinase id=124250 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg2_3.0_scaffold_3865_c_23
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

12167..12892
DNA (726bp) protein (242aa)
periplasmic sensor signal transduction histidine kinase Tax=CG_GN02-01
resE; signal transduction histidine kinase id=124250 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Sensor histidine kinase
cg2_3.0_scaffold_3865_c_24
ACD78, Gracilibacteria, Bacteria

Not on your lists

12948..13142
DNA (195bp) protein (65aa)
transmembrane_regions 31..53 id=123268 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
transmembrane_regions 31..53 Tax=ACD78
cg2_3.0_scaffold_3865_c_25
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

13161..13400
DNA (240bp) protein (80aa)
transmembrane_regions 31..53 Tax=CG_GN02-01
transmembrane_regions 31..53 id=123268 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg2_3.0_scaffold_3865_c_26
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(13402..14100)
DNA (699bp) protein (233aa)
heat-inducible transcription repressor HrcA; K03705 heat-inducible transcriptional repressor Tax=CG_GN02-01
heat-inducible transcription repressor HrcA; K03705 heat-inducible transcriptional repressor id=123270 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
heat-inducible transcription repressor HrcA
Displaying 26 items

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