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ACD2_4

Alias: ACD2_1414.46805.64

Search features with annotation key words

Displaying items 31-60 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD2_4_31
ACD2, Gracilibacteria, Bacteria

Not on your lists

22870..23391
DNA (522bp) protein (174aa)
22870..23391 + (rbs_motif=TAA rbs_spacer=12bp)
hypothetical protein Tax=ACD2
ACD2_4_32
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(23388..23717)
DNA (330bp) protein (110aa)
23388..23717 - (rbs_motif=TAA rbs_spacer=9bp)
hypothetical protein Tax=ACD2
ACD2_4_33
ACD2, Gracilibacteria, Bacteria

Not on your lists

23815..25530
DNA (1716bp) protein (572aa)
seg (db=Seg db_id=seg from=447 to=458)
seg (db=Seg db_id=seg from=296 to=309)
seg (db=Seg db_id=seg from=267 to=281)
seg (db=Seg db_id=seg from=228 to=242)
ACD2_4_34
ACD2, Gracilibacteria, Bacteria

Not on your lists

25586..25786
DNA (201bp) protein (67aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=43 to=65)
transmembrane_regions 43..65 Tax=ACD2
ACD2_4_35
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(25943..28018)
DNA (2076bp) protein (692aa)
adenylate cyclase
transmembrane_regions (db=TMHMM db_id=tmhmm from=319 to=338)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=24 to=42)
ACD2_4_36
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(28020..29381)
DNA (1362bp) protein (454aa)
seg (db=Seg db_id=seg from=267 to=278)
seg (db=Seg db_id=seg from=12 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=29)
coiled-coil (db=Coil db_id=coil from=433 to=454 evalue=NA)
ACD2_4_37
ACD2, Gracilibacteria, Bacteria

Not on your lists

29468..29878
DNA (411bp) protein (137aa)
seg (db=Seg db_id=seg from=7 to=44)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
transmembrane_regions 7..26 Tax=ACD2
ACD2_4_38
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(30000..31058)
DNA (1059bp) protein (353aa)
seg (db=Seg db_id=seg from=332 to=347)
seg (db=Seg db_id=seg from=224 to=253)
seg (db=Seg db_id=seg from=127 to=136)
seg (db=Seg db_id=seg from=73 to=93)
ACD2_4_39
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(31074..31718)
DNA (645bp) protein (215aa)
rnhB; ribonuclease HII
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=2 to=209 evalue=3.2e-36 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
RNase_HII (db=HMMPfam db_id=PF01351 from=5 to=197 evalue=1.7e-28 interpro_id=IPR001352 interpro_description=Ribonuclease HII/HIII GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: ribonuclease H activity (GO:0004523))
RIBONUCLEASE HII (db=HMMPanther db_id=PTHR10954 from=4 to=201 evalue=1.6e-24 interpro_id=IPR001352 interpro_description=Ribonuclease HII/HIII GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: ribonuclease H activity (GO:0004523))
ACD2_4_40
ACD2, Gracilibacteria, Bacteria

Not on your lists

31828..32376
DNA (549bp) protein (183aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=17 to=39)
transmembrane_regions 17..39 Tax=ACD2
ACD2_4_41
unknown

Not on your lists

comp(32429..33067)
DNA (639bp) protein (213aa)
Hydroxyacylglutathione hydrolase n=2 Tax=Fusobacterium RepID=D4CY60_9FUSO (db=UNIREF evalue=9.0e-27 bit_score=123.0 identity=33.33 coverage=94.8356807511737)
Zn-dependent hydrolase
Metallo-hydrolase/oxidoreductase (db=superfamily db_id=SSF56281 from=1 to=201 evalue=4.4e-36)
no description (db=Gene3D db_id=G3DSA:3.60.15.10 from=22 to=199 evalue=2.5e-26)
ACD2_4_42
unknown

Not on your lists

comp(33093..33362)
DNA (270bp) protein (90aa)
Pathogenicity locus n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1Z6_9FIRM (db=UNIREF evalue=2.0e-18 bit_score=94.4 identity=56.41 coverage=85.5555555555556)
Pathogenicity locus.
Cdd1 (db=HMMPfam db_id=PF11731 from=4 to=87 evalue=2.0e-21 interpro_id=IPR021725 interpro_description=Pathogenicity locus)
Pathogenicity locus n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1Z6_9FIRM Tax=ACD2
ACD2_4_43

Not on your lists

comp(33381..33848)
DNA (468bp) protein (156aa)
Activator of Hsp90 ATPase 1 family protein
Bet v1-like (db=superfamily db_id=SSF55961 from=1 to=155 evalue=6.6e-20)
AHSA1 (db=HMMPfam db_id=PF08327 from=12 to=154 evalue=2.4e-17 interpro_id=IPR013538 interpro_description=Activator of Hsp90 ATPase homologue 1-like GO=Biological Process: response to stress (GO:0006950))
hypothetical protein alias=ACD2_1414.46805.64_43,ACD2_1414.46805.64G0043,ACD2_C00004G00043 id=34024 tax=ACD2 species=Leptospira interrogans genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes organism_group=BD1-5 organism_desc=BD1-5
ACD2_4_44

Not on your lists

comp(33878..34303)
DNA (426bp) protein (142aa)
Glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (db=superfamily db_id=SSF54593 from=1 to=138 evalue=5.2e-25)
no description (db=Gene3D db_id=G3DSA:3.10.180.30 from=1 to=137 evalue=3.8e-22)
3-dmu-9_3-mt (db=HMMPfam db_id=PF06983 from=3 to=135 evalue=3.4e-06)
ACD2_4_45
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(34407..34862)
DNA (456bp) protein (152aa)
hypothetical protein
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=1 to=150 evalue=2.1e-19)
PCMT (db=HMMPfam db_id=PF01135 from=1 to=138 evalue=1.8e-15 interpro_id=IPR000682 interpro_description=Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO=Molecular Function: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity (GO:0004719), Biological Process: protein modification process (GO:0006464))
PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE (db=HMMPanther db_id=PTHR11579 from=1 to=137 evalue=2.6e-14 interpro_id=IPR000682 interpro_description=Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO=Molecular Function: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity (GO:0004719), Biological Process: protein modification process (GO:0006464))
ACD2_4_46
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(35127..35411)
DNA (285bp) protein (95aa)
seg (db=Seg db_id=seg from=67 to=82)
seg 67..82 Tax=ACD2
ACD2_4_47
unknown

Not on your lists

comp(35670..36170)
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SFS1_ACIJO (db=UNIREF evalue=4.0e-29 bit_score=130.0 identity=43.71 coverage=88.622754491018)
hypothetical protein
HIT-like (db=superfamily db_id=SSF54197 from=12 to=164 evalue=4.4e-18 interpro_id=IPR011146 interpro_description=Histidine triad-like motif GO=Molecular Function: catalytic activity (GO:0003824))
no description (db=Gene3D db_id=G3DSA:3.30.428.10 from=12 to=114 evalue=9.9e-11 interpro_id=IPR011151 interpro_description=Histidine triad motif GO=Molecular Function: catalytic activity (GO:0003824))
ACD2_4_48
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(36181..36459)
DNA (279bp) protein (93aa)
Cystinosin/ERS1p repeat protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=62 to=79)
transmembrane_regions (db=TMHMM db_id=tmhmm from=35 to=57)
ACD2_4_49
unknown

Not on your lists

comp(36462..37133)
DNA (672bp) protein (224aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFW2_9EURY (db=UNIREF evalue=2.0e-12 bit_score=76.3 identity=26.05 coverage=91.0714285714286)
HAD family hydrolase (db=KEGG evalue=1.0e-11 bit_score=73.6 identity=26.82 coverage=92.4107142857143)
HAD-like (db=superfamily db_id=SSF56784 from=1 to=219 evalue=1.1e-26)
no description (db=Gene3D db_id=G3DSA:3.40.50.1000 from=2 to=159 evalue=1.2e-07)
ACD2_4_50
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(37284..38102)
DNA (819bp) protein (273aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=25)
UNCHARACTERIZED (db=HMMPanther db_id=PTHR12277:SF9 from=21 to=269 evalue=1.1e-53)
UNCHARACTERIZED (db=HMMPanther db_id=PTHR12277 from=21 to=269 evalue=1.1e-53)
ACD2_4_51
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(38113..38778)
DNA (666bp) protein (222aa)
38113..38778 - (rbs_motif=TAA rbs_spacer=9bp)
hypothetical protein Tax=ACD2
ACD2_4_52

Not on your lists

38958..40391
DNA (1434bp) protein (478aa)
23S rRNA m(5)U-1939 methyltransferase n=2 Tax=Roseburia intestinalis RepID=D4L0G9_9FIRM (db=UNIREF evalue=6.0e-76 bit_score=288.0 identity=36.55 coverage=97.6987447698745)
23S rRNA m(5)u-1939 methyltransferase (EC:2.1.1.-)
TRMA_2 (db=PatternScan db_id=PS01231 from=459 to=469 evalue=0.0 interpro_id=IPR010280 interpro_description=(Uracil-5)-methyltransferase GO=Biological Process: RNA processing (GO:0006396), Molecular Function: RNA methyltransferase activity (GO:0008173))
TRMA_1 (db=PatternScan db_id=PS01230 from=406 to=437 evalue=0.0 interpro_id=IPR010280 interpro_description=(Uracil-5)-methyltransferase GO=Biological Process: RNA processing (GO:0006396), Molecular Function: RNA methyltransferase activity (GO:0008173))
ACD2_4_53
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(40467..40889)
DNA (423bp) protein (141aa)
40467..40889 - (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=ACD2
ACD2_4_54

Not on your lists

comp(40922..42211)
DNA (1290bp) protein (430aa)
integral membrane protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=95 to=114)
seg (db=Seg db_id=seg from=42 to=64)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
ACD2_4_55
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(42272..42691)
DNA (420bp) protein (140aa)
hypothetical protein
DUF523 (db=HMMPfam db_id=PF04463 from=2 to=134 evalue=3.9e-24 interpro_id=IPR007553 interpro_description=Protein of unknown function DUF523)
hypothetical protein alias=ACD2_C00004G00055,ACD2_1414.46805.64G0055,ACD2_1414.46805.64_55 id=33986 tax=ACD2 species=Desulfovibrio vulgaris genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=BD1-5 organism_desc=BD1-5
hypothetical protein Tax=ACD2
ACD2_4_56
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(42811..44052)
DNA (1242bp) protein (414aa)
Putative uncharacterized protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LRZ7_DESBD (db=UNIREF evalue=7.0e-84 bit_score=314.0 identity=40.24 coverage=88.4057971014493)
hypothetical protein
hypothetical protein
hypothetical protein
ACD2_4_57

Not on your lists

comp(44059..44589)
DNA (531bp) protein (177aa)
seg (db=Seg db_id=seg from=91 to=102)
Uncharacterized protein {ECO:0000313|EMBL:EKE30050.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ACD2_4_58
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(44610..45344)
DNA (735bp) protein (245aa)
44610..45344 - (rbs_motif=TAA rbs_spacer=11bp)
hypothetical protein Tax=ACD2
ACD2_4_59
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(45563..46033)
DNA (471bp) protein (157aa)
45563..46033 - (rbs_motif=TAA rbs_spacer=15bp)
hypothetical protein Tax=ACD2
ACD2_4_60
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(46213..46680)
DNA (468bp) protein (156aa)
seg (db=Seg db_id=seg from=25 to=36)
transmembrane_regions (db=TMHMM db_id=tmhmm from=23 to=40)
transmembrane_regions 23..40 Tax=ACD2
Displaying items 31-60 of 61 in total

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