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ACD2_31

Alias: ACD2_3189.48949.73

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD2_31_1
ACD2, Gracilibacteria, Bacteria

Not on your lists

149..262
DNA (114bp) protein (38aa)
149..262 + (rbs_motif=TAA rbs_spacer=7bp)
hypothetical protein Tax=ACD2
ACD2_31_2
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(893..1513)
DNA (621bp) protein (207aa)
putative iron-sulfur flavoprotein
transmembrane_regions (db=TMHMM db_id=tmhmm from=153 to=175)
Flavoproteins (db=superfamily db_id=SSF52218 from=1 to=203 evalue=1.4e-24)
no description (db=Gene3D db_id=G3DSA:3.40.50.360 from=1 to=157 evalue=4.8e-21)
ACD2_31_3
ACD2, Gracilibacteria, Bacteria

Not on your lists

1742..3745
DNA (2004bp) protein (668aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
seg (db=Seg db_id=seg from=10 to=31)
seg (db=Seg db_id=seg from=562 to=573)
Pili subunits (db=superfamily db_id=SSF54523 from=10 to=134 evalue=3.4e-17)
ACD2_31_4
ACD2, Gracilibacteria, Bacteria

Not on your lists

3930..5390
DNA (1461bp) protein (487aa)
seg (db=Seg db_id=seg from=113 to=126)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
HCP-like (db=superfamily db_id=SSF81901 from=218 to=452 evalue=6.2e-11)
no description (db=Gene3D db_id=G3DSA:1.25.40.10 from=218 to=452 evalue=5.1e-09 interpro_id=IPR011990 interpro_description=Tetratricopeptide-like helical GO=Molecular Function: binding (GO:0005488))
ACD2_31_5
ACD2, Gracilibacteria, Bacteria

Not on your lists

5474..6043
DNA (570bp) protein (190aa)
seg (db=Seg db_id=seg from=169 to=180)
seg (db=Seg db_id=seg from=106 to=117)
seg (db=Seg db_id=seg from=62 to=81)
seg (db=Seg db_id=seg from=38 to=49)
ACD2_31_6
ACD2, Gracilibacteria, Bacteria

Not on your lists

6344..6553
DNA (210bp) protein (70aa)
6344..6553 + (rbs_motif=TAA rbs_spacer=7bp)
hypothetical protein Tax=ACD2
ACD2_31_7
ACD2, Gracilibacteria, Bacteria

Not on your lists

6968..7237
DNA (270bp) protein (90aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=72)
transmembrane_regions 13..35 Tax=ACD2
ACD2_31_8
ACD2, Gracilibacteria, Bacteria

Not on your lists

8009..8209
DNA (201bp) protein (67aa)
8009..8209 + (rbs_motif=TAAA rbs_spacer=7bp)
hypothetical protein Tax=ACD2
ACD2_31_9
ACD2, Gracilibacteria, Bacteria

Not on your lists

8765..9328
DNA (564bp) protein (188aa)
seg (db=Seg db_id=seg from=52 to=68)
seg 52..68 Tax=ACD2
ACD2_31_10
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(11508..11669)
DNA (162bp) protein (54aa)
seg (db=Seg db_id=seg from=6 to=20)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
transmembrane_regions 5..24 Tax=ACD2
ACD2_31_11
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(11679..15710)
DNA (4032bp) protein (1344aa)
seg (db=Seg db_id=seg from=1313 to=1335)
seg (db=Seg db_id=seg from=884 to=901)
seg (db=Seg db_id=seg from=753 to=764)
seg (db=Seg db_id=seg from=233 to=248)
ACD2_31_12

Not on your lists

comp(15845..16735)
DNA (891bp) protein (297aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=275 to=292)
seg (db=Seg db_id=seg from=39 to=55)
seg (db=Seg db_id=seg from=246 to=269)
seg (db=Seg db_id=seg from=275 to=286)
ACD2_31_13
ACD2, Gracilibacteria, Bacteria

Not on your lists

16982..17527
DNA (546bp) protein (182aa)
ribosome recycling factor
seg (db=Seg db_id=seg from=158 to=180)
coiled-coil (db=Coil db_id=coil from=2 to=23 evalue=NA)
coiled-coil (db=Coil db_id=coil from=153 to=178 evalue=NA)
ACD2_31_14
ACD2, Gracilibacteria, Bacteria

Not on your lists

17616..20624
DNA (3009bp) protein (1003aa)
transcription-repair coupling factor
transcription-repair coupling factor
transcription-repair coupling factor
Transcription-repair coupling factor n=2 Tax=Chloroflexus RepID=A9WHG9_CHLAA (db=UNIREF evalue=4.0e-121 bit_score=439.0 identity=39.13 coverage=60.8175473579262)
ACD2_31_15
ACD2, Gracilibacteria, Bacteria

Not on your lists

20707..21939
DNA (1233bp) protein (411aa)
seg (db=Seg db_id=seg from=389 to=409)
seg (db=Seg db_id=seg from=339 to=350)
seg (db=Seg db_id=seg from=240 to=254)
seg (db=Seg db_id=seg from=161 to=174)
ACD2_31_16
unknown

Not on your lists

22033..23040
DNA (1008bp) protein (336aa)
DNA polymerase III subunit delta
Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VCJ1_9CLOT (db=UNIREF evalue=3.0e-12 bit_score=76.3 identity=22.59 coverage=91.3690476190476)
DNA_pol3_delta (db=HMMPfam db_id=PF06144 from=13 to=183 evalue=5.0e-16 interpro_id=IPR010372 interpro_description=DNA polymerase III, delta GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Cellular Component: DNA polymerase III complex (GO:0009360))
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=28 to=204 evalue=1.9e-07)
ACD2_31_17
ACD2, Gracilibacteria, Bacteria

Not on your lists

23068..24210
DNA (1143bp) protein (381aa)
peptidylprolyl isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] (db=KEGG evalue=3.0e-20 bit_score=103.0 identity=49.56 coverage=25.9842519685039)
transmembrane_regions (db=TMHMM db_id=tmhmm from=66 to=88)
seg (db=Seg db_id=seg from=21 to=35)
FKBP-like (db=superfamily db_id=SSF54534 from=106 to=378 evalue=6.1e-22)
ACD2_31_18
unknown

Not on your lists

24210..24854
DNA (645bp) protein (215aa)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAP9_9CLOT (db=UNIREF evalue=3.0e-45 bit_score=184.0 identity=44.19 coverage=97.6744186046512)
trmD; tRNA (Guanine-n(1)-)-methyltransferase
alpha/beta knot (db=superfamily db_id=SSF75217 from=1 to=212 evalue=9.6e-49)
no description (db=Gene3D db_id=G3DSA:3.40.1280.10 from=1 to=160 evalue=1.6e-33)
ACD2_31_19
ACD2, Gracilibacteria, Bacteria

Not on your lists

24870..25466
DNA (597bp) protein (199aa)
hypothetical protein
seg (db=Seg db_id=seg from=94 to=112)
seg (db=Seg db_id=seg from=59 to=81)
seg (db=Seg db_id=seg from=32 to=46)
ACD2_31_20

Not on your lists

comp(25625..26101)
DNA (477bp) protein (159aa)
Rubredoxin-type Fe4 protein
RUBREDOXIN (db=PatternScan db_id=PS00202 from=33 to=43 evalue=0.0 interpro_id=IPR018527 interpro_description=Rubredoxin, iron-binding site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: metal ion binding (GO:0046872))
Rubredoxin-like (db=superfamily db_id=SSF57802 from=1 to=53 evalue=4.9e-15)
Rubredoxin (db=HMMPfam db_id=PF00301 from=3 to=49 evalue=8.3e-14 interpro_id=IPR004039 interpro_description=Rubredoxin-type Fe(Cys)4 protein GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: metal ion binding (GO:0046872))
ACD2_31_21

Not on your lists

26269..27756
DNA (1488bp) protein (496aa)
hypothetical protein
hypothetical protein
hypothetical protein
Metal dependent phosphohydrolase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CXB8_HALOH (db=UNIREF evalue=3.0e-91 bit_score=339.0 identity=45.68 coverage=81.25)
ACD2_31_22
ACD2, Gracilibacteria, Bacteria

Not on your lists

27819..28595
DNA (777bp) protein (259aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=99 to=118)
seg (db=Seg db_id=seg from=37 to=66)
transmembrane_regions (db=TMHMM db_id=tmhmm from=227 to=249)
ACD2_31_23
ACD2, Gracilibacteria, Bacteria

Not on your lists

28550..30085
DNA (1536bp) protein (512aa)
ComEC/Rec2-like protein
seg (db=Seg db_id=seg from=15 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=475 to=492)
transmembrane_regions (db=TMHMM db_id=tmhmm from=419 to=441)
ACD2_31_24
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(30042..30761)
DNA (720bp) protein (240aa)
coiled-coil (db=Coil db_id=coil from=16 to=37 evalue=NA)
seg (db=Seg db_id=seg from=17 to=38)
seg (db=Seg db_id=seg from=158 to=173)
coiled-coil 16..37 Tax=ACD2
ACD2_31_25

Not on your lists

comp(30752..32005)
DNA (1254bp) protein (418aa)
Serine hydroxymethyltransferase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RLQ3_FIBSS (db=UNIREF evalue=9.0e-135 bit_score=483.0 identity=53.19 coverage=97.6076555023923)
glycine hydroxymethyltransferase (EC:2.1.2.1)
glycine hydroxymethyltransferase (EC:2.1.2.1)
glycine hydroxymethyltransferase (EC:2.1.2.1)
glycine-serine Jill Banfield (11/15/12)
glycine<->threonine Jill Banfield (11/15/12)
ACD2_31_26
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(32012..33388)
DNA (1377bp) protein (459aa)
ctpA; carboxy-terminal processing protease CtpA (EC:3.4.21.102)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=38)
seg (db=Seg db_id=seg from=436 to=446)
coiled-coil (db=Coil db_id=coil from=401 to=422 evalue=NA)
ACD2_31_27
ACD2, Gracilibacteria, Bacteria

Not on your lists

33650..33964
DNA (315bp) protein (105aa)
33650..33964 + (rbs_motif=TAA rbs_spacer=11bp)
hypothetical protein Tax=ACD2
ACD2_31_28
ACD2, Gracilibacteria, Bacteria

Not on your lists

33966..34166
DNA (201bp) protein (67aa)
33966..34166 + (rbs_motif=TAA rbs_spacer=8bp)
hypothetical protein Tax=ACD2
ACD2_31_29
ACD2, Gracilibacteria, Bacteria

Not on your lists

34256..35620
DNA (1365bp) protein (455aa)
seg (db=Seg db_id=seg from=438 to=454)
seg (db=Seg db_id=seg from=325 to=340)
seg (db=Seg db_id=seg from=180 to=198)
transmembrane_regions (db=TMHMM db_id=tmhmm from=433 to=452)
ACD2_31_30
ACD2, Gracilibacteria, Bacteria

Not on your lists

35624..36820
DNA (1197bp) protein (399aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=291 to=313)
transmembrane_regions (db=TMHMM db_id=tmhmm from=318 to=340)
transmembrane_regions (db=TMHMM db_id=tmhmm from=347 to=369)
transmembrane_regions (db=TMHMM db_id=tmhmm from=374 to=393)
Displaying items 1-30 of 38 in total

View Taxonomy