Alias: ACD2_3189.48949.73
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD2_31_1
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
149..262
|
149..262 + (rbs_motif=TAA rbs_spacer=7bp)
hypothetical protein Tax=ACD2
|
|
ACD2_31_2
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(893..1513)
|
putative iron-sulfur flavoprotein
transmembrane_regions (db=TMHMM db_id=tmhmm from=153 to=175)
Flavoproteins (db=superfamily db_id=SSF52218 from=1 to=203 evalue=1.4e-24)
no description (db=Gene3D db_id=G3DSA:3.40.50.360 from=1 to=157 evalue=4.8e-21)
|
|
ACD2_31_3
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
1742..3745
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
seg (db=Seg db_id=seg from=10 to=31)
seg (db=Seg db_id=seg from=562 to=573)
Pili subunits (db=superfamily db_id=SSF54523 from=10 to=134 evalue=3.4e-17)
|
|
ACD2_31_4
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
3930..5390
|
seg (db=Seg db_id=seg from=113 to=126)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
HCP-like (db=superfamily db_id=SSF81901 from=218 to=452 evalue=6.2e-11)
no description (db=Gene3D db_id=G3DSA:1.25.40.10 from=218 to=452 evalue=5.1e-09 interpro_id=IPR011990 interpro_description=Tetratricopeptide-like helical GO=Molecular Function: binding (GO:0005488))
|
|
ACD2_31_5
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
5474..6043
|
seg (db=Seg db_id=seg from=169 to=180)
seg (db=Seg db_id=seg from=106 to=117)
seg (db=Seg db_id=seg from=62 to=81)
seg (db=Seg db_id=seg from=38 to=49)
|
|
ACD2_31_6
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
6344..6553
|
6344..6553 + (rbs_motif=TAA rbs_spacer=7bp)
hypothetical protein Tax=ACD2
|
|
ACD2_31_7
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
6968..7237
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=72)
transmembrane_regions 13..35 Tax=ACD2
|
|
ACD2_31_8
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
8009..8209
|
8009..8209 + (rbs_motif=TAAA rbs_spacer=7bp)
hypothetical protein Tax=ACD2
|
|
ACD2_31_9
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
8765..9328
|
seg (db=Seg db_id=seg from=52 to=68)
seg 52..68 Tax=ACD2
|
|
ACD2_31_10
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(11508..11669)
|
seg (db=Seg db_id=seg from=6 to=20)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
transmembrane_regions 5..24 Tax=ACD2
|
|
ACD2_31_11
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(11679..15710)
|
seg (db=Seg db_id=seg from=1313 to=1335)
seg (db=Seg db_id=seg from=884 to=901)
seg (db=Seg db_id=seg from=753 to=764)
seg (db=Seg db_id=seg from=233 to=248)
|
|
ACD2_31_12
uncultured bacterium (gcode 4), Bacteria
|
Not on your lists |
comp(15845..16735)
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=275 to=292)
seg (db=Seg db_id=seg from=39 to=55)
seg (db=Seg db_id=seg from=246 to=269)
seg (db=Seg db_id=seg from=275 to=286)
|
|
ACD2_31_13
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
16982..17527
|
ribosome recycling factor
seg (db=Seg db_id=seg from=158 to=180)
coiled-coil (db=Coil db_id=coil from=2 to=23 evalue=NA)
coiled-coil (db=Coil db_id=coil from=153 to=178 evalue=NA)
|
|
ACD2_31_14
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
17616..20624
|
transcription-repair coupling factor
transcription-repair coupling factor
transcription-repair coupling factor
Transcription-repair coupling factor n=2 Tax=Chloroflexus RepID=A9WHG9_CHLAA (db=UNIREF evalue=4.0e-121 bit_score=439.0 identity=39.13 coverage=60.8175473579262)
|
|
ACD2_31_15
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
20707..21939
|
seg (db=Seg db_id=seg from=389 to=409)
seg (db=Seg db_id=seg from=339 to=350)
seg (db=Seg db_id=seg from=240 to=254)
seg (db=Seg db_id=seg from=161 to=174)
|
|
ACD2_31_16
unknown
|
Not on your lists |
22033..23040
|
DNA polymerase III subunit delta
Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VCJ1_9CLOT (db=UNIREF evalue=3.0e-12 bit_score=76.3 identity=22.59 coverage=91.3690476190476)
DNA_pol3_delta (db=HMMPfam db_id=PF06144 from=13 to=183 evalue=5.0e-16 interpro_id=IPR010372 interpro_description=DNA polymerase III, delta GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Cellular Component: DNA polymerase III complex (GO:0009360))
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=28 to=204 evalue=1.9e-07)
|
|
ACD2_31_17
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
23068..24210
|
peptidylprolyl isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] (db=KEGG evalue=3.0e-20 bit_score=103.0 identity=49.56 coverage=25.9842519685039)
transmembrane_regions (db=TMHMM db_id=tmhmm from=66 to=88)
seg (db=Seg db_id=seg from=21 to=35)
FKBP-like (db=superfamily db_id=SSF54534 from=106 to=378 evalue=6.1e-22)
|
|
ACD2_31_18
unknown
|
Not on your lists |
24210..24854
|
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AAP9_9CLOT (db=UNIREF evalue=3.0e-45 bit_score=184.0 identity=44.19 coverage=97.6744186046512)
trmD; tRNA (Guanine-n(1)-)-methyltransferase
alpha/beta knot (db=superfamily db_id=SSF75217 from=1 to=212 evalue=9.6e-49)
no description (db=Gene3D db_id=G3DSA:3.40.1280.10 from=1 to=160 evalue=1.6e-33)
|
|
ACD2_31_19
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
24870..25466
|
hypothetical protein
seg (db=Seg db_id=seg from=94 to=112)
seg (db=Seg db_id=seg from=59 to=81)
seg (db=Seg db_id=seg from=32 to=46)
|
|
ACD2_31_20
uncultured bacterium (gcode 4), Bacteria
|
Not on your lists |
comp(25625..26101)
|
Rubredoxin-type Fe4 protein
RUBREDOXIN (db=PatternScan db_id=PS00202 from=33 to=43 evalue=0.0 interpro_id=IPR018527 interpro_description=Rubredoxin, iron-binding site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: metal ion binding (GO:0046872))
Rubredoxin-like (db=superfamily db_id=SSF57802 from=1 to=53 evalue=4.9e-15)
Rubredoxin (db=HMMPfam db_id=PF00301 from=3 to=49 evalue=8.3e-14 interpro_id=IPR004039 interpro_description=Rubredoxin-type Fe(Cys)4 protein GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: metal ion binding (GO:0046872))
|
|
ACD2_31_21
uncultured bacterium (gcode 4), Bacteria
|
Not on your lists |
26269..27756
|
hypothetical protein
hypothetical protein
hypothetical protein
Metal dependent phosphohydrolase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CXB8_HALOH (db=UNIREF evalue=3.0e-91 bit_score=339.0 identity=45.68 coverage=81.25)
|
|
ACD2_31_22
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
27819..28595
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=99 to=118)
seg (db=Seg db_id=seg from=37 to=66)
transmembrane_regions (db=TMHMM db_id=tmhmm from=227 to=249)
|
|
ACD2_31_23
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
28550..30085
|
ComEC/Rec2-like protein
seg (db=Seg db_id=seg from=15 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=475 to=492)
transmembrane_regions (db=TMHMM db_id=tmhmm from=419 to=441)
|
|
ACD2_31_24
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(30042..30761)
|
coiled-coil (db=Coil db_id=coil from=16 to=37 evalue=NA)
seg (db=Seg db_id=seg from=17 to=38)
seg (db=Seg db_id=seg from=158 to=173)
coiled-coil 16..37 Tax=ACD2
|
|
ACD2_31_25
uncultured bacterium (gcode 4), Bacteria
|
Not on your lists |
comp(30752..32005)
|
Serine hydroxymethyltransferase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RLQ3_FIBSS (db=UNIREF evalue=9.0e-135 bit_score=483.0 identity=53.19 coverage=97.6076555023923)
glycine hydroxymethyltransferase (EC:2.1.2.1)
glycine hydroxymethyltransferase (EC:2.1.2.1)
glycine hydroxymethyltransferase (EC:2.1.2.1)
|
glycine-serine
Jill Banfield
(11/15/12)
glycine<->threonine
Jill Banfield
(11/15/12)
|
ACD2_31_26
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(32012..33388)
|
ctpA; carboxy-terminal processing protease CtpA (EC:3.4.21.102)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=38)
seg (db=Seg db_id=seg from=436 to=446)
coiled-coil (db=Coil db_id=coil from=401 to=422 evalue=NA)
|
|
ACD2_31_27
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
33650..33964
|
33650..33964 + (rbs_motif=TAA rbs_spacer=11bp)
hypothetical protein Tax=ACD2
|
|
ACD2_31_28
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
33966..34166
|
33966..34166 + (rbs_motif=TAA rbs_spacer=8bp)
hypothetical protein Tax=ACD2
|
|
ACD2_31_29
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
34256..35620
|
seg (db=Seg db_id=seg from=438 to=454)
seg (db=Seg db_id=seg from=325 to=340)
seg (db=Seg db_id=seg from=180 to=198)
transmembrane_regions (db=TMHMM db_id=tmhmm from=433 to=452)
|
|
ACD2_31_30
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
35624..36820
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=291 to=313)
transmembrane_regions (db=TMHMM db_id=tmhmm from=318 to=340)
transmembrane_regions (db=TMHMM db_id=tmhmm from=347 to=369)
transmembrane_regions (db=TMHMM db_id=tmhmm from=374 to=393)
|