ggKbase home page

ACD2_35

Alias: ACD2_2393.16756.55

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD2_35_1
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(59..361)
DNA (303bp) protein (101aa)
59..361 - (rbs_motif=TAA rbs_spacer=6bp)
hypothetical protein Tax=ACD2
ACD2_35_2
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(465..704)
DNA (240bp) protein (80aa)
alkilphosphonate uptake protein; K06193 phosphonoacetate hydrolase [EC:3.11.1.2] (db=KEGG evalue=2.0e-10 bit_score=68.2 identity=54.17 coverage=81.25)
Prokaryotic SH3-related domain (db=superfamily db_id=SSF82057 from=12 to=79 evalue=9.4e-12)
PhnA (db=HMMPfam db_id=PF03831 from=17 to=66 evalue=1.1e-11 interpro_id=IPR013988 interpro_description=PhnA protein, C-terminal)
alkilphosphonate uptake protein; K06193 phosphonoacetate hydrolase [EC:3.11.1.2] alias=ACD2_C00035G00002,ACD2_2393.16756.55G0002,ACD2_2393.16756.55_2 id=35185 tax=ACD2 species=Azorhizobium caulinodans genus=Azorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria organism_group=BD1-5 organism_desc=BD1-5
ACD2_35_3
ACD2, Gracilibacteria, Bacteria

Not on your lists


comp(727..2433)
DNA (1707bp) protein (569aa)
Arginyl-tRNA synthetase n=12 Tax=Bacteroides RepID=SYR_BACTN (db=UNIREF evalue=4.0e-116 bit_score=422.0 identity=41.53 coverage=93.4973637961336)
arginyl-tRNA synthetase
arginyl-tRNA synthetase
arginyl-tRNA synthetase
ACD2_35_4
ACD2, Gracilibacteria, Bacteria

Not on your lists

2630..2758
DNA (129bp) protein (43aa)
2630..2758 + (rbs_motif=TAAAA rbs_spacer=5bp)
hypothetical protein Tax=ACD2
ACD2_35_5
ACD2, Gracilibacteria, Bacteria

Not on your lists

3142..3435
DNA (294bp) protein (98aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=73 to=95)
transmembrane_regions 73..95 Tax=ACD2
ACD2_35_6
ACD2, Gracilibacteria, Bacteria

Not on your lists

3930..4982
DNA (1053bp) protein (351aa)
3930..4982 + (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=ACD2
ACD2_35_7
ACD2, Gracilibacteria, Bacteria

Not on your lists

6332..6538
DNA (207bp) protein (69aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=2 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=46)
transmembrane_regions 2..24 Tax=ACD2
ACD2_35_8
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(6549..7277)
DNA (729bp) protein (243aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=20 to=34)
transmembrane_regions 12..34 Tax=ACD2
ACD2_35_9
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(7264..7365)
DNA (102bp) protein (34aa)
7264..7365 - (rbs_motif=TAAA rbs_spacer=5bp)
hypothetical protein Tax=ACD2
ACD2_35_10
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(7401..7745)
DNA (345bp) protein (115aa)
seg (db=Seg db_id=seg from=71 to=86)
transmembrane_regions (db=TMHMM db_id=tmhmm from=71 to=93)
transmembrane_regions (db=TMHMM db_id=tmhmm from=11 to=30)
transmembrane_regions 11..30 Tax=ACD2
ACD2_35_11
ACD2, Gracilibacteria, Bacteria

Not on your lists

7770..7949
DNA (180bp) protein (60aa)
7770..7949 + (rbs_motif=TACAA rbs_spacer=7bp)
hypothetical protein Tax=ACD2
ACD2_35_12
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(8138..8956)
DNA (819bp) protein (273aa)
8138..8956 - (rbs_motif=TAA rbs_spacer=10bp)
hypothetical protein Tax=ACD2
ACD2_35_13
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(9054..9917)
DNA (864bp) protein (288aa)
seg (db=Seg db_id=seg from=278 to=287)
seg (db=Seg db_id=seg from=159 to=165)
seg (db=Seg db_id=seg from=114 to=134)
seg (db=Seg db_id=seg from=37 to=49)
ACD2_35_14
unknown

Not on your lists

comp(10959..11618)
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YIK6_9FLAO (db=UNIREF evalue=1.0e-12 bit_score=76.6 identity=50.0 coverage=30.9090909090909)
seg (db=Seg db_id=seg from=112 to=187)
coiled-coil (db=Coil db_id=coil from=197 to=218 evalue=NA)
coiled-coil (db=Coil db_id=coil from=99 to=190 evalue=NA)
ACD2_35_15
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(12742..13623)
DNA (882bp) protein (294aa)
hypothetical protein
hypothetical protein alias=ACD2_C00035G00015,ACD2_2393.16756.55G0015,ACD2_2393.16756.55_15 id=35178 tax=ACD2 species=Natrialba magadii genus=Natrialba taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota organism_group=BD1-5 organism_desc=BD1-5
hypothetical protein Tax=ACD2
ACD2_35_16
ACD2, Gracilibacteria, Bacteria

Not on your lists

13898..14236
DNA (339bp) protein (113aa)
hypothetical protein
Predicted pyrophosphohydrolase, MazG-related, RS21-C6 type (db=HMMPIR db_id=PIRSF029826 from=1 to=112 evalue=2.9e-49 interpro_id=IPR011394 interpro_description=NTP Pyrophosphohydrolase MazG-related, RS21-C6)
all-alpha NTP pyrophosphatases (db=superfamily db_id=SSF101386 from=1 to=111 evalue=2.0e-28)
MazG (db=HMMPfam db_id=PF03819 from=56 to=97 evalue=2.6e-05 interpro_id=IPR004518 interpro_description=NTP pyrophosphohydrolase MazG, putative catalytic core)
ACD2_35_17
ACD2, Gracilibacteria, Bacteria

Not on your lists

14238..15803
DNA (1566bp) protein (522aa)
hypothetical protein
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y785_9FIRM (db=UNIREF evalue=3.0e-128 bit_score=462.0 identity=42.17 coverage=98.8505747126437)
ACD2_35_18
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(15915..16544)
DNA (630bp) protein (210aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
SLH (db=ProfileScan db_id=PS51272 from=76 to=138 evalue=9.832 interpro_id=IPR001119 interpro_description=S-layer homology domain)
transmembrane_regions 5..24 Tax=ACD2
ACD2_35_19
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(16695..16820)
DNA (126bp) protein (42aa)
16695..16820 - (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=ACD2
Displaying 19 items

View Taxonomy