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ACD2_36

Alias: ACD2_231.8469.63

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD2_36_1
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(2..1129)
DNA (1128bp) protein (376aa)
transposase
seg (db=Seg db_id=seg from=69 to=83)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=121 to=305 evalue=3.7e-06 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
INTEGRASE (db=ProfileScan db_id=PS50994 from=134 to=305 evalue=8.649 interpro_id=IPR001584 interpro_description=Integrase, catalytic core GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA integration (GO:0015074))
ACD2_36_2
ACD2, Gracilibacteria, Bacteria

Not on your lists

1528..2157
DNA (630bp) protein (210aa)
1528..2157 + (rbs_motif=TAA rbs_spacer=11bp)
hypothetical protein Tax=ACD2
ACD2_36_3
unknown

Not on your lists

comp(2226..2750)
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UMI1_9FLAO (db=UNIREF evalue=6.0e-26 bit_score=120.0 identity=38.1 coverage=95.4285714285714)
hypothetical protein (db=KEGG evalue=2.0e-17 bit_score=91.7 identity=39.04 coverage=79.4285714285714)
transmembrane_regions (db=TMHMM db_id=tmhmm from=144 to=166)
transmembrane_regions (db=TMHMM db_id=tmhmm from=102 to=124)
ACD2_36_4
ACD2, Gracilibacteria, Bacteria

Not on your lists

3191..4117
DNA (927bp) protein (309aa)
3191..4117 + (rbs_motif=TAA rbs_spacer=9bp)
hypothetical protein Tax=ACD2
ACD2_36_5
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(4254..4778)
DNA (525bp) protein (175aa)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=174 evalue=1.6e-12)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=5 to=153 evalue=6.3e-06)
P-loop containing nucleoside triphosphate hydrolases Tax=ACD2
ACD2_36_6
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(4876..5094)
DNA (219bp) protein (73aa)
4876..5094 - (rbs_motif=TAAA rbs_spacer=5bp)
hypothetical protein Tax=ACD2
ACD2_36_7
ACD2, Gracilibacteria, Bacteria

Not on your lists

5280..7541
DNA (2262bp) protein (754aa)
Ig-like, group 2 n=3 Tax=Clostridium thermocellum RepID=A3DBG8_CLOTH (db=UNIREF evalue=2.0e-50 bit_score=204.0 identity=34.39 coverage=57.6923076923077)
S-layer protein
seg (db=Seg db_id=seg from=675 to=689)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
ACD2_36_8
ACD2, Gracilibacteria, Bacteria

Not on your lists

7640..8317
DNA (678bp) protein (226aa)
coenzyme F420-dependent NADP oxidoreductase
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=1 to=215 evalue=1.9e-31)
no description (db=Gene3D db_id=G3DSA:3.40.50.720 from=1 to=224 evalue=3.1e-31 interpro_id=IPR016040 interpro_description=NAD(P)-binding domain GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: binding (GO:0005488), Biological Process: metabolic process (GO:0008152))
DUDULIN-RELATED (db=HMMPanther db_id=PTHR14239 from=1 to=223 evalue=2.4e-25)
ACD2_36_9
unknown

Not on your lists

8466..8531
DNA (66bp) protein (22aa)
8466..8531 + (rbs_motif=TAA rbs_spacer=14bp)
Displaying 9 items

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