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ACD2_39

Alias: ACD2_1787.15686.57

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD2_39_1
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(248..643)
DNA (396bp) protein (132aa)
248..643 - (rbs_motif=TAAA rbs_spacer=7bp)
hypothetical protein Tax=ACD2
ACD2_39_2

Not on your lists

927..1340
DNA (414bp) protein (138aa)
927..1340 + (rbs_motif=TAA rbs_spacer=11bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE29978.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD2_39_3
ACD2, Gracilibacteria, Bacteria

Not on your lists

1362..1928
DNA (567bp) protein (189aa)
seg (db=Seg db_id=seg from=142 to=153)
seg (db=Seg db_id=seg from=107 to=115)
coiled-coil (db=Coil db_id=coil from=50 to=80 evalue=NA)
coiled-coil 50..80 Tax=ACD2
ACD2_39_4
ACD2, Gracilibacteria, Bacteria

Not on your lists

1998..2354
DNA (357bp) protein (119aa)
coiled-coil (db=Coil db_id=coil from=83 to=108 evalue=NA)
seg (db=Seg db_id=seg from=93 to=111)
coiled-coil 83..108 Tax=ACD2
ACD2_39_5
ACD2, Gracilibacteria, Bacteria

Not on your lists

2373..2933
DNA (561bp) protein (187aa)
coiled-coil (db=Coil db_id=coil from=23 to=44 evalue=NA)
coiled-coil 23..44 Tax=ACD2
ACD2_39_6
ACD2, Gracilibacteria, Bacteria

Not on your lists

4957..5634
DNA (678bp) protein (226aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=13 to=24)
transmembrane_regions 7..29 Tax=ACD2
ACD2_39_7
unknown

Not on your lists

5624..6322
DNA (699bp) protein (233aa)
heat shock protein DnaJ domain-containing protein
Chaperone protein DnaJ n=1 Tax=bacterium S5 RepID=D3C0V1_9BACT (db=UNIREF evalue=2.0e-22 bit_score=108.0 identity=53.76 coverage=37.7682403433476)
coiled-coil (db=Coil db_id=coil from=40 to=61 evalue=NA)
seg (db=Seg db_id=seg from=90 to=114)
ACD2_39_8
ACD2, Gracilibacteria, Bacteria

Not on your lists

6873..7325
DNA (453bp) protein (151aa)
tRNA/rRNA methyltransferase (SpoU) (db=KEGG evalue=5.0e-29 bit_score=129.0 identity=42.36 coverage=94.7019867549669)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Chlorobium phaeobacteroides BS1 RepID=B3EQK2_CHLPB (db=UNIREF evalue=6.0e-29 bit_score=129.0 identity=42.36 coverage=94.7019867549669)
alpha/beta knot (db=superfamily db_id=SSF75217 from=2 to=150 evalue=5.6e-24)
RNA METHYLTRANSFERASE (db=HMMPanther db_id=PTHR12029 from=6 to=150 evalue=3.6e-23)
ACD2_39_9

Not on your lists

comp(7332..8552)
DNA (1221bp) protein (407aa)
putative cysteine desulfurase
Aminotran_5 (db=HMMPfam db_id=PF00266 from=18 to=394 evalue=3.4e-92 interpro_id=IPR000192 interpro_description=Aminotransferase, class V/Cysteine desulfurase GO=Biological Process: metabolic process (GO:0008152))
PLP-dependent transferases (db=superfamily db_id=SSF53383 from=1 to=406 evalue=5.5e-84 interpro_id=IPR015424 interpro_description=Pyridoxal phosphate-dependent transferase, major domain)
CYSTEINE DESULFURYLASE (db=HMMPanther db_id=PTHR11601 from=17 to=405 evalue=4.0e-68)
ACD2_39_10
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(8554..9237)
DNA (684bp) protein (228aa)
seg (db=Seg db_id=seg from=19 to=31)
seg (db=Seg db_id=seg from=95 to=114)
UPF0051 (db=HMMPfam db_id=PF01458 from=43 to=199 evalue=9.8e-18 interpro_id=IPR000825 interpro_description=SUF system FeS cluster assembly, SufBD GO=Molecular Function: protein binding (GO:0005515), Biological Process: iron-sulfur cluster assembly (GO:0016226))
Stabilizer of iron transporter SufD (db=superfamily db_id=SSF101960 from=44 to=227 evalue=2.6e-13)
ACD2_39_11
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(9476..10849)
DNA (1374bp) protein (458aa)
FeS assembly protein SufB
FeS assembly protein SufB
FeS assembly protein SufB
Predicted membrane components of an uncharacterized iron-regulated ABC-type transporter SufB n=1 Tax=Thermoanaerobacter tengcongensis RepID=Q8R6W1_THETN (db=UNIREF evalue=1.0e-129 bit_score=467.0 identity=51.53 coverage=99.1266375545851)
ACD2_39_12
unknown

Not on your lists

comp(11069..11854)
DNA (786bp) protein (262aa)
hypothetical protein
FeS assembly ATPase SufC n=1 Tax=Ethanoligenens harbinense YUAN-3 RepID=D3NIG1_9FIRM (db=UNIREF evalue=1.0e-47 bit_score=192.0 identity=40.0 coverage=90.8396946564885)
ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF6 from=2 to=239 evalue=3.0e-58 interpro_id=IPR010230 interpro_description=ATPase SufC, SUF system FeS cluster assembly GO=Molecular Function: ATP binding (GO:0005524), Biological Process: transport (GO:0006810))
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=2 to=239 evalue=3.0e-58)
ACD2_39_13
ACD2, Gracilibacteria, Bacteria

Not on your lists

11991..12758
DNA (768bp) protein (256aa)
11991..12758 + (rbs_motif=TAAA rbs_spacer=13bp)
hypothetical protein Tax=ACD2
ACD2_39_14
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(12759..13526)
DNA (768bp) protein (256aa)
Exodeoxyribonuclease III Xth n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I5T7_9CLOT (db=UNIREF evalue=9.0e-83 bit_score=310.0 identity=57.65 coverage=97.65625)
exodeoxyribonuclease III Xth (EC:4.2.99.18)
exodeoxyribonuclease III Xth (EC:4.2.99.18)
exodeoxyribonuclease III Xth (EC:4.2.99.18)
ACD2_39_15

Not on your lists

13715..15169
DNA (1455bp) protein (485aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=9 Tax=Thermoanaerobacteraceae RepID=GATA_THEP3 (db=UNIREF evalue=8.0e-118 bit_score=427.0 identity=47.83 coverage=96.701030927835)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A
ACD2_39_16
ACD2, Gracilibacteria, Bacteria

Not on your lists

15390..15749
DNA (360bp) protein (120aa)
Pili subunits (db=superfamily db_id=SSF54523 from=1 to=74 evalue=1.8e-06)
Pili subunits Tax=ACD2
Displaying 16 items

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