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ACD2_45

Alias: ACD2_812.8390.53

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD2_45_1

Not on your lists

comp(2..469)
DNA (468bp) protein (156aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
seg (db=Seg db_id=seg from=21 to=42)
Pili subunits (db=superfamily db_id=SSF54523 from=21 to=118 evalue=8.4e-18)
BCTERIALGSPG (db=FPrintScan db_id=PR00813 from=20 to=45 evalue=4.1e-08 interpro_id=IPR000983 interpro_description=Bacterial general secretion pathway protein G GO=Molecular Function: protein transporter activity (GO:0008565), Cellular Component: type II protein secretion system complex (GO:0015627), Biological Process: protein secretion by the type II secretion system (GO:0015628))
ACD2_45_2
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(710..2530)
DNA (1821bp) protein (607aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=13 to=34)
Pili subunits (db=superfamily db_id=SSF54523 from=13 to=110 evalue=1.3e-19)
BCTERIALGSPG (db=FPrintScan db_id=PR00813 from=12 to=37 evalue=1.3e-06 interpro_id=IPR000983 interpro_description=Bacterial general secretion pathway protein G GO=Molecular Function: protein transporter activity (GO:0008565), Cellular Component: type II protein secretion system complex (GO:0015627), Biological Process: protein secretion by the type II secretion system (GO:0015628))
ACD2_45_3
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(3047..4183)
DNA (1137bp) protein (379aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CP08_9FIRM (db=UNIREF evalue=7.0e-120 bit_score=434.0 identity=61.94 coverage=94.1952506596306)
malic enzyme
malic enzyme
malic enzyme
ACD2_45_4
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(4311..5036)
DNA (726bp) protein (242aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=16 to=27)
SH3_3 (db=HMMPfam db_id=PF08239 from=37 to=87 evalue=2.4e-10 interpro_id=IPR013247 interpro_description=SH3, type 3)
no description (db=HMMSmart db_id=SM00287 from=28 to=91 evalue=4.8e-08 interpro_id=IPR003646 interpro_description=SH3-like domain, bacterial)
ACD2_45_5
ACD2, Gracilibacteria, Bacteria

Not on your lists

5296..5904
DNA (609bp) protein (203aa)
gmk; guanylate kinase
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=3 to=187 evalue=1.9e-38)
GUANYLATE KINASE-RELATED (db=HMMPanther db_id=PTHR23117 from=39 to=192 evalue=2.1e-28)
Guanylate_kin (db=HMMPfam db_id=PF00625 from=7 to=187 evalue=1.1e-25 interpro_id=IPR008144 interpro_description=Guanylate kinase)
ACD2_45_6
unknown

Not on your lists

5870..6289
DNA (420bp) protein (140aa)
Impact protein n=1 Tax=Thalassiobium sp. R2A62 RepID=C7DAQ3_9RHOB (db=UNIREF evalue=2.0e-11 bit_score=71.2 identity=36.75 coverage=77.1428571428572)
hypothetical protein (db=KEGG evalue=7.0e-10 bit_score=65.9 identity=29.57 coverage=77.8571428571429)
Ribosomal protein S5 domain 2-like (db=superfamily db_id=SSF54211 from=14 to=139 evalue=2.5e-13 interpro_id=IPR020568 interpro_description=Ribosomal protein S5 domain 2-type fold)
UPF0029 (db=HMMPfam db_id=PF01205 from=28 to=134 evalue=2.4e-12 interpro_id=IPR001498 interpro_description=Uncharacterised protein family UPF0029, Impact, N-terminal)
ACD2_45_7
unknown

Not on your lists

6289..7005
DNA (717bp) protein (239aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6K5_9CLOT (db=UNIREF evalue=3.0e-35 bit_score=151.0 identity=41.13 coverage=92.8870292887029)
seg (db=Seg db_id=seg from=172 to=188)
seg (db=Seg db_id=seg from=45 to=56)
ACD2_45_8
ACD2, Gracilibacteria, Bacteria

Not on your lists

7097..7432
DNA (336bp) protein (112aa)
coiled-coil (db=Coil db_id=coil from=7 to=28 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=46 to=68)
coiled-coil 7..28 Tax=ACD2
ACD2_45_9
ACD2, Gracilibacteria, Bacteria

Not on your lists

7515..7862
DNA (348bp) protein (116aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
transmembrane_regions (db=TMHMM db_id=tmhmm from=48 to=67)
seg (db=Seg db_id=seg from=52 to=65)
transmembrane_regions 21..43 Tax=ACD2
ACD2_45_10
ACD2, Gracilibacteria, Bacteria

Not on your lists

7826..8452
DNA (627bp) protein (209aa)
endonuclease/exonuclease/phosphatase (db=KEGG evalue=3.0e-10 bit_score=68.2 identity=32.24 coverage=65.0717703349282)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=25 evalue=7.0)
endonuclease/exonuclease/phosphatase Tax=ACD2
endonuclease/exonuclease/phosphatase alias=ACD2_C00045G00010,ACD2_812.8390.53_10,ACD2_812.8390.53G0010 id=35298 tax=ACD2 species=Flavobacterium johnsoniae genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes organism_group=BD1-5 organism_desc=BD1-5
Displaying 10 items

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