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ACD2_51

Alias: ACD2_1271.24879.52

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD2_51_1
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(56..202)
DNA (147bp) protein (49aa)
56..202 - (rbs_motif=TAA rbs_spacer=6bp)
hypothetical protein Tax=ACD2
ACD2_51_2
ACD2, Gracilibacteria, Bacteria

Not on your lists

1649..4297
DNA (2649bp) protein (883aa)
repeat-containing protein
seg (db=Seg db_id=seg from=429 to=445)
seg (db=Seg db_id=seg from=460 to=469)
seg (db=Seg db_id=seg from=499 to=506)
ACD2_51_3
ACD2, Gracilibacteria, Bacteria

Not on your lists

4399..4605
DNA (207bp) protein (69aa)
4399..4605 + (rbs_motif=TAAA rbs_spacer=9bp)
hypothetical protein Tax=ACD2
ACD2_51_4
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(4533..4760)
DNA (228bp) protein (76aa)
4533..4760 - (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=ACD2
ACD2_51_5
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(4760..5914)
DNA (1155bp) protein (385aa)
hypothetical protein (db=KEGG evalue=3.0e-25 bit_score=119.0 identity=28.53 coverage=76.1038961038961)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
seg (db=Seg db_id=seg from=24 to=35)
CHITINASE_18 (db=PatternScan db_id=PS01095 from=168 to=176 evalue=0.0 interpro_id=IPR001579 interpro_description=Glycoside hydrolase, chitinase active site GO=Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553), Biological Process: carbohydrate metabolic process (GO:0005975))
ACD2_51_6
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(5904..9524)
DNA (3621bp) protein (1207aa)
Glycosyl transferase and polysaccharide deacetylase fusion protein
Glycosyl transferase and polysaccharide deacetylase fusion protein
Glycosyl transferase and polysaccharide deacetylase fusion protein
Glycosyl transferase and polysaccharide deacetylase fusion protein n=4 Tax=Bacillus RepID=C2W6E3_BACCE (db=UNIREF evalue=5.0e-127 bit_score=459.0 identity=36.55 coverage=59.4863297431649)
ACD2_51_7
unknown

Not on your lists

9939..13589
DNA (3651bp) protein (1217aa)
DNA mismatch repair protein mutS n=3 Tax=Eubacterium siraeum RepID=D4JRX4_9FIRM (db=UNIREF evalue=4.0e-10 bit_score=71.6 identity=25.65 coverage=17.6663927691044)
hexA; DNA mismatch repair protein HexA; K03555 DNA mismatch repair protein MutS (db=KEGG evalue=1.0e-09 bit_score=69.7 identity=24.0 coverage=26.2941659819228)
seg (db=Seg db_id=seg from=766 to=779)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=280 to=503 evalue=4.1e-15)
ACD2_51_8
ACD2, Gracilibacteria, Bacteria

Not on your lists

13664..15622
DNA (1959bp) protein (653aa)
seg (db=Seg db_id=seg from=571 to=600)
seg (db=Seg db_id=seg from=620 to=649)
seg (db=Seg db_id=seg from=215 to=235)
coiled-coil (db=Coil db_id=coil from=581 to=628 evalue=NA)
ACD2_51_9
ACD2, Gracilibacteria, Bacteria

Not on your lists

15759..16031
DNA (273bp) protein (91aa)
15759..16031 + (rbs_motif=TAA rbs_spacer=13bp)
hypothetical protein Tax=ACD2
ACD2_51_10
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(16141..16872)
DNA (732bp) protein (244aa)
zinc/iron permease
seg (db=Seg db_id=seg from=48 to=59)
transmembrane_regions (db=TMHMM db_id=tmhmm from=223 to=242)
transmembrane_regions (db=TMHMM db_id=tmhmm from=191 to=210)
ACD2_51_11
ACD2, Gracilibacteria, Bacteria

Not on your lists

17171..17803
DNA (633bp) protein (211aa)
17171..17803 + (rbs_motif=TAAAA rbs_spacer=14bp)
hypothetical protein Tax=ACD2
ACD2_51_12
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(17713..17910)
DNA (198bp) protein (66aa)
17713..17910 - (rbs_motif=TAAA rbs_spacer=12bp)
hypothetical protein Tax=ACD2
ACD2_51_13
ACD2, Gracilibacteria, Bacteria

Not on your lists

17968..18927
DNA (960bp) protein (320aa)
17968..18927 + (rbs_motif=TAAA rbs_spacer=13bp)
hypothetical protein Tax=ACD2
ACD2_51_14
ACD2, Gracilibacteria, Bacteria

Not on your lists

19766..20536
DNA (771bp) protein (257aa)
Restriction endonuclease-like (db=superfamily db_id=SSF52980 from=62 to=187 evalue=9.4e-11 interpro_id=IPR011335 interpro_description=Restriction endonuclease, type II-like GO=Molecular Function: DNA binding (GO:0003677))
Mrr_cat (db=HMMPfam db_id=PF04471 from=85 to=174 evalue=1.4e-07 interpro_id=IPR007560 interpro_description=Restriction endonuclease, type IV-like, Mrr GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: endonuclease activity (GO:0004519), Biological Process: DNA restriction-modification system (GO:0009307))
Restriction endonuclease-like 62..187 Tax=ACD2
ACD2_51_15

Not on your lists

20840..23854
DNA (3015bp) protein (1005aa)
Ig-like, group 2 n=3 Tax=Clostridium thermocellum RepID=A3DBG8_CLOTH (db=UNIREF evalue=9.0e-40 bit_score=169.0 identity=32.83 coverage=42.6865671641791)
hypothetical protein
seg (db=Seg db_id=seg from=803 to=817)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
ACD2_51_16
ACD2, Gracilibacteria, Bacteria

Not on your lists

24144..24821
DNA (678bp) protein (226aa)
NADP oxidoreductase, coenzyme F420-dependent
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=1 to=213 evalue=7.6e-31)
no description (db=Gene3D db_id=G3DSA:3.40.50.720 from=1 to=224 evalue=3.8e-30 interpro_id=IPR016040 interpro_description=NAD(P)-binding domain GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: binding (GO:0005488), Biological Process: metabolic process (GO:0008152))
DUDULIN-RELATED (db=HMMPanther db_id=PTHR14239 from=1 to=208 evalue=1.7e-25)
ACD2_51_17
ACD2, Gracilibacteria, Bacteria

Not on your lists

24821..24943
DNA (123bp) protein (41aa)
24821..24943 + (rbs_motif=TAA rbs_spacer=12bp)
hypothetical protein Tax=ACD2
Displaying 17 items

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