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ACD30_1

Alias: ACD30_26594.22644.10

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD30_1_1
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

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comp(3..1325)
DNA (1323bp) protein (441aa)
Regulatory protein, MerR:Resolvase, N-terminal n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4C9D7_CROWT (db=UNIREF evalue=2.0e-09 bit_score=67.8 identity=59.65 coverage=12.6984126984127)
resolvase domain-containing protein
seg (db=Seg db_id=seg from=184 to=197)
transmembrane_regions (db=TMHMM db_id=tmhmm from=218 to=240)
ACD30_1_2
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


1915..4392
DNA (2478bp) protein (826aa)
leucyl-tRNA synthetase
leucyl-tRNA synthetase
Leucyl-tRNA synthetase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CG69_THET1 (db=UNIREF evalue=0.0 bit_score=876.0 identity=51.79 coverage=94.6731234866828)
coiled-coil (db=Coil db_id=coil from=647 to=668 evalue=NA)
ACD30_1_3
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(4514..4798)
DNA (285bp) protein (95aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=39)
Uncharacterized protein {ECO:0000313|EMBL:KKQ09820.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_1_4
GWA1_OP11_36_8, Daviesbacteria, Microgenomates, Bacteria

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4922..5374
DNA (453bp) protein (151aa)
4922..5374 + (rbs_motif=TAA rbs_spacer=11bp)
Uncharacterized protein {ECO:0000313|EMBL:KKQ14076.1}; TaxID=1618417 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA1_36_8.;"
hypothetical protein
ACD30_1_5
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

5485..6063
DNA (579bp) protein (193aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=17 to=33)
FAMILY NOT NAMED (db=HMMPanther db_id=PTHR21180 from=54 to=192 evalue=1.7e-10)
ACD30_1_6
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

6136..7155
DNA (1020bp) protein (340aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=244 to=266)
seg (db=Seg db_id=seg from=314 to=325)
seg (db=Seg db_id=seg from=97 to=115)
ACD30_1_7
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

7186..7449
DNA (264bp) protein (88aa)
RHH_1 (db=HMMPfam db_id=PF01402 from=3 to=41 evalue=2.6e-06 interpro_id=IPR002145 interpro_description=CopG-like DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
Uncharacterized protein {ECO:0000313|EMBL:KKQ09816.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_1_8
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

7454..7855
DNA (402bp) protein (134aa)
PIN domain-like (db=superfamily db_id=SSF88723 from=1 to=129 evalue=2.1e-14)
PIN (db=HMMPfam db_id=PF01850 from=4 to=126 evalue=1.6e-06 interpro_id=IPR002716 interpro_description=PilT protein, N-terminal)
Uncharacterized protein {ECO:0000313|EMBL:KKQ09815.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_1_9
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

7966..9033
DNA (1068bp) protein (356aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=108 to=130)
transmembrane_regions (db=TMHMM db_id=tmhmm from=85 to=104)
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=72)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
ACD30_1_10
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

9126..10817
DNA (1692bp) protein (564aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase (Fragment) n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KRR5_9BACT (db=UNIREF evalue=2.0e-77 bit_score=294.0 identity=36.3 coverage=93.7943262411348)
seg (db=Seg db_id=seg from=476 to=490)
ARGINYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR11956 from=23 to=563 evalue=7.9e-118 interpro_id=IPR001278 interpro_description=Arginyl-tRNA synthetase, class Ic GO=Molecular Function: arginine-tRNA ligase activity (GO:0004814), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: arginyl-tRNA aminoacylation (GO:0006420))
ACD30_1_11
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

10818..11804
DNA (987bp) protein (329aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=21 to=34)
Metallo-dependent phosphatases (db=superfamily db_id=SSF56300 from=93 to=318 evalue=1.2e-26)
ACD30_1_12
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

11950..12453
DNA (504bp) protein (168aa)
nucleoside-diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase, NDK (db=superfamily db_id=SSF54919 from=1 to=166 evalue=9.0e-44 interpro_id=IPR001564 interpro_description=Nucleoside diphosphate kinase, core GO=Molecular Function: nucleoside diphosphate kinase activity (GO:0004550), Molecular Function: ATP binding (GO:0005524), Biological Process: GTP biosynthetic process (GO:0006183), Biological Process: UTP biosynthetic process (GO:0006228), Biological Process: CTP biosynthetic process (GO:0006241))
no description (db=HMMSmart db_id=SM00562 from=2 to=167 evalue=5.9e-41 interpro_id=IPR001564 interpro_description=Nucleoside diphosphate kinase, core GO=Molecular Function: nucleoside diphosphate kinase activity (GO:0004550), Molecular Function: ATP binding (GO:0005524), Biological Process: GTP biosynthetic process (GO:0006183), Biological Process: UTP biosynthetic process (GO:0006228), Biological Process: CTP biosynthetic process (GO:0006241))
NDK (db=HMMPfam db_id=PF00334 from=3 to=166 evalue=4.8e-36 interpro_id=IPR001564 interpro_description=Nucleoside diphosphate kinase, core GO=Molecular Function: nucleoside diphosphate kinase activity (GO:0004550), Molecular Function: ATP binding (GO:0005524), Biological Process: GTP biosynthetic process (GO:0006183), Biological Process: UTP biosynthetic process (GO:0006228), Biological Process: CTP biosynthetic process (GO:0006241))
ACD30_1_13
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

12521..13033
DNA (513bp) protein (171aa)
PaaX family transcriptional regulator
PaaX_C (db=HMMPfam db_id=PF08223 from=93 to=164 evalue=3.6e-11 interpro_id=IPR013225 interpro_description=PaaX-like, C-terminal)
CRISPR_Cas2 (db=HMMPfam db_id=PF09827 from=99 to=148 evalue=0.00016 interpro_id=IPR019199 interpro_description=Virulence-associated protein D / CRISPR associated protein Cas2)
paaX; repressor in ring oxydation complex/phenylacetic acid degradation pathway related protein (PaaX); K02616 phenylacetic acid degradation operon negative regulatory protein alias=ACD30_C00001G00013,ACD30_26594.22644.10G0013,ACD30_26594.22644.10_13 id=35420 tax=ACD30 species=Sulfolobus solfataricus genus=Sulfolobus taxon_order=Sulfolobales taxon_class=Thermoprotei phylum=Crenarchaeota organism_group=OP11 organism_desc=OP11
ACD30_1_14
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

13181..13879
DNA (699bp) protein (233aa)
sortase family protein
sortase family protein n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI000174396F (db=UNIREF evalue=5.0e-11 bit_score=71.2 identity=31.06 coverage=64.8068669527897)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
Sortase (db=HMMPfam db_id=PF04203 from=94 to=229 evalue=4.4e-20 interpro_id=IPR005754 interpro_description=Peptidase C60, sortase A/B)
ACD30_1_15
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

14022..15212
DNA (1191bp) protein (397aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=26)
seg (db=Seg db_id=seg from=316 to=327)
seg (db=Seg db_id=seg from=14 to=25)
PEGA (db=HMMPfam db_id=PF08308 from=41 to=107 evalue=1.8e-14 interpro_id=IPR013229 interpro_description=PEGA)
ACD30_1_16
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

15339..16355
DNA (1017bp) protein (339aa)
Cell shape determining protein, MreB/Mrl family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDH8_THET1 (db=UNIREF evalue=7.0e-110 bit_score=400.0 identity=59.94 coverage=97.6401179941003)
MreB/Mrl family cell shape determining protein
MreB/Mrl family cell shape determining protein
mreB: cell shape determining protein, MreB/M (db=HMMTigr db_id=TIGR00904 from=4 to=333 evalue=1.4e-174 interpro_id=IPR004753 interpro_description=Cell shape determining protein MreB/Mrl GO=Biological Process: cell morphogenesis (GO:0000902))
ACD30_1_17
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

16703..17491
DNA (789bp) protein (263aa)
NAD-dependent epimerase/dehydratase
coiled-coil (db=Coil db_id=coil from=41 to=62 evalue=NA)
NAD DEPENDENT EPIMERASE/DEHYDRATASE (db=HMMPanther db_id=PTHR10366 from=1 to=259 evalue=5.0e-100)
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=2 to=257 evalue=2.3e-77)
ACD30_1_18
GWA1_OP11_36_8, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(17535..17900)
DNA (366bp) protein (122aa)
hypothetical protein
Uncharacterised conserved protein, UCP035652 type (db=HMMPIR db_id=PIRSF035652 from=7 to=120 evalue=2.6e-22 interpro_id=IPR012657 interpro_description=Conserved hypothetical protein CHP02436)
Ribosomal_S23p (db=HMMPfam db_id=PF05635 from=16 to=110 evalue=5.8e-12 interpro_id=IPR008815 interpro_description=23S rRNA-associated protein)
hypothetical protein alias=ACD30_C00001G00018,ACD30_26594.22644.10G0018,ACD30_26594.22644.10_18 id=35414 tax=ACD30 species=Planctomyces limnophilus genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes organism_group=OP11 organism_desc=OP11
ACD30_1_19
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(17913..18662)
DNA (750bp) protein (250aa)
polysaccharide pyruvyl transferase csab (EC:2.4.1.187)
seg (db=Seg db_id=seg from=115 to=126)
Glyco_tran_WecB (db=HMMPfam db_id=PF03808 from=54 to=230 evalue=1.2e-45 interpro_id=IPR004629 interpro_description=Glycosyl transferase WecB/TagA/CpsF GO=Biological Process: biosynthetic process (GO:0009058))
wecB_tagA_cpsF: glycosyl transferase, (db=HMMTigr db_id=TIGR00696 from=53 to=237 evalue=2.9e-34 interpro_id=IPR004629 interpro_description=Glycosyl transferase WecB/TagA/CpsF GO=Biological Process: biosynthetic process (GO:0009058))
ACD30_1_20
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(18721..19839)
DNA (1119bp) protein (373aa)
Glycosyl transferase group 1 n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NRZ3_ROSCS (db=UNIREF evalue=9.0e-80 bit_score=300.0 identity=42.15 coverage=98.1233243967828)
group 1 glycosyl transferase
group 1 glycosyl transferase
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=1 to=370 evalue=8.1e-78)
ACD30_1_21

Not on your lists

comp(19869..20075)
DNA (207bp) protein (69aa)
Putative DNA-binding domain (db=superfamily db_id=SSF46955 from=12 to=64 evalue=9.1e-11 interpro_id=IPR009061 interpro_description=Putative DNA binding domain GO=Molecular Function: nucleotide binding (GO:0000166))
excise: DNA binding domain, excisionase fami (db=HMMTigr db_id=TIGR01764 from=13 to=63 evalue=3.3e-07 interpro_id=IPR010093 interpro_description=Excisionase/Xis, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.1660.10 from=14 to=63 evalue=0.00032)
Uncharacterized protein {ECO:0000313|EMBL:EKD91276.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD30_1_22
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(20256..20519)
DNA (264bp) protein (88aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KT13_9BACT (db=UNIREF evalue=2.0e-11 bit_score=71.6 identity=56.1 coverage=92.0454545454545)
coiled-coil (db=Coil db_id=coil from=25 to=46 evalue=NA)
seg (db=Seg db_id=seg from=5 to=21)
ACD30_1_23
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(20516..20800)
DNA (285bp) protein (95aa)
hypothetical protein
hypothetical protein alias=ACD30_C00001G00023,ACD30_26594.22644.10G0023,ACD30_26594.22644.10_23 id=35413 tax=ACD30 species=Synechococcus elongatus genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria organism_group=OP11 organism_desc=OP11
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_16_curated
ACD30_1_24
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


comp(20993..21583)
DNA (591bp) protein (197aa)
50S ribosomal protein L7/L12
seg (db=Seg db_id=seg from=105 to=125)
seg (db=Seg db_id=seg from=20 to=73)
L12: ribosomal protein L7/L12 (db=HMMTigr db_id=TIGR00855 from=72 to=196 evalue=2.0e-53 interpro_id=IPR000206 interpro_description=Ribosomal protein L7/L12 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD30_1_25
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


comp(21576..22103)
DNA (528bp) protein (176aa)
rplJ; 50S ribosomal protein L10
coiled-coil (db=Coil db_id=coil from=5 to=26 evalue=NA)
Ribosomal_L10 (db=HMMPfam db_id=PF00466 from=3 to=98 evalue=4.7e-21 interpro_id=IPR001790 interpro_description=Ribosomal protein L10 GO=Cellular Component: intracellular (GO:0005622), Biological Process: ribosome biogenesis (GO:0042254))
Q30KS2_CANFA_Q30KS2; (db=BlastProDom db_id=PD968187 from=25 to=165 evalue=3.0e-10)
ACD30_1_26
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(22322..22600)
DNA (279bp) protein (93aa)
22322..22600 - (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_16_curated
Displaying 26 items

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