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ACD30_11

Alias: ACD30_32008.27180.10

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD30_11_1
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(3..83)
DNA (81bp) protein (27aa)
seg (db=Seg db_id=seg from=4 to=20)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
Uncharacterized protein {ECO:0000313|EMBL:KKQ09083.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_11_2
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

125..877
DNA (753bp) protein (251aa)
seg (db=Seg db_id=seg from=215 to=227)
coiled-coil (db=Coil db_id=coil from=215 to=236 evalue=NA)
TPR-like (db=superfamily db_id=SSF48452 from=6 to=244 evalue=1.1e-08)
Uncharacterized protein {ECO:0000313|EMBL:KKQ09082.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_11_3
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

921..1601
DNA (681bp) protein (227aa)
seg (db=Seg db_id=seg from=47 to=65)
transmembrane_regions (db=TMHMM db_id=tmhmm from=43 to=65)
Pili subunits (db=superfamily db_id=SSF54523 from=46 to=175 evalue=1.6e-18)
no description (db=Gene3D db_id=G3DSA:3.30.700.10 from=45 to=174 evalue=2.7e-07)
ACD30_11_4
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

1605..2186
DNA (582bp) protein (194aa)
seg (db=Seg db_id=seg from=18 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
PROKAR_NTER_METHYL (db=PatternScan db_id=PS00409 from=8 to=28 evalue=0.0 interpro_id=IPR001120 interpro_description=Prokaryotic N-terminal methylation site)
Pili subunits (db=superfamily db_id=SSF54523 from=10 to=176 evalue=3.1e-20)
ACD30_11_5
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

2253..3575
DNA (1323bp) protein (441aa)
beta-glucosidase A (EC:3.2.1.21)
beta-glucosidase A (EC:3.2.1.21)
Beta-glucosidase n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E1X9_DICTD (db=UNIREF evalue=8.0e-97 bit_score=357.0 identity=43.99 coverage=89.3424036281179)
coiled-coil (db=Coil db_id=coil from=72 to=93 evalue=NA)
ACD30_11_6
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

3585..3968
DNA (384bp) protein (128aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Cylindrospermopsis raciborskii CS-505 RepID=D4TGL2_9NOST (db=UNIREF evalue=2.0e-22 bit_score=108.0 identity=50.89 coverage=85.9375)
Uncharacterised conserved protein, UCP035652 type (db=HMMPIR db_id=PIRSF035652 from=1 to=123 evalue=8.5e-45 interpro_id=IPR012657 interpro_description=Conserved hypothetical protein CHP02436)
TIGR02436: conserved hypothetical protein T (db=HMMTigr db_id=TIGR02436 from=10 to=120 evalue=9.4e-37 interpro_id=IPR012657 interpro_description=Conserved hypothetical protein CHP02436)
ACD30_11_7
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

3977..5791
DNA (1815bp) protein (605aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=170 to=192)
transmembrane_regions (db=TMHMM db_id=tmhmm from=212 to=234)
transmembrane_regions (db=TMHMM db_id=tmhmm from=239 to=261)
transmembrane_regions (db=TMHMM db_id=tmhmm from=274 to=296)
ACD30_11_8
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

5788..5982
DNA (195bp) protein (65aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=40 to=62)
Uncharacterized protein {ECO:0000313|EMBL:KKQ09076.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_11_9
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

6212..8506
DNA (2295bp) protein (765aa)
hypothetical protein
seg (db=Seg db_id=seg from=87 to=106)
transmembrane_regions (db=TMHMM db_id=tmhmm from=82 to=104)
transmembrane_regions (db=TMHMM db_id=tmhmm from=39 to=61)
ACD30_11_10
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

8549..8728
DNA (180bp) protein (60aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
Uncharacterized protein {ECO:0000313|EMBL:KKQ09074.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_11_11
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(8762..9064)
DNA (303bp) protein (101aa)
8762..9064 - (rbs_motif=TAA rbs_spacer=10bp)
Uncharacterized protein {ECO:0000313|EMBL:KKQ09073.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_11_12
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(9314..9718)
DNA (405bp) protein (135aa)
ASCH domain-containing protein
Putative uncharacterized protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MKE6_9BACT (db=UNIREF evalue=3.0e-13 bit_score=77.4 identity=31.06 coverage=95.5555555555556)
Uncharacterized protein {ECO:0000313|EMBL:KKQ09072.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_11_13
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(9744..10304)
DNA (561bp) protein (187aa)
9744..10304 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKQ09071.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_11_14
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

10352..10867
DNA (516bp) protein (172aa)
MutT/NUDIX family protein n=2 Tax=Prevotella RepID=C9PX80_9BACT (db=UNIREF evalue=5.0e-26 bit_score=120.0 identity=36.59 coverage=93.6046511627907)
mutator mutT protein (EC:3.6.1.-)
Nudix (db=superfamily db_id=SSF55811 from=9 to=169 evalue=4.8e-34 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
no description (db=Gene3D db_id=G3DSA:3.90.79.10 from=28 to=151 evalue=3.1e-18 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
ACD30_11_15

Not on your lists

10944..11126
DNA (183bp) protein (61aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=28 to=50)
seg (db=Seg db_id=seg from=25 to=39)
SECE_SEC61G (db=PatternScan db_id=PS01067 from=6 to=34 evalue=0.0 interpro_id=IPR001901 interpro_description=Protein secE/sec61-gamma protein GO=Biological Process: protein targeting (GO:0006605), Biological Process: intracellular protein transport (GO:0006886), Cellular Component: membrane (GO:0016020))
SecE (db=HMMPfam db_id=PF00584 from=2 to=53 evalue=1.1e-19 interpro_id=IPR001901 interpro_description=Protein secE/sec61-gamma protein GO=Biological Process: protein targeting (GO:0006605), Biological Process: intracellular protein transport (GO:0006886), Cellular Component: membrane (GO:0016020))
ACD30_11_16
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

11116..11706
DNA (591bp) protein (197aa)
seg (db=Seg db_id=seg from=2 to=17)
seg (db=Seg db_id=seg from=160 to=184)
Transcription antitermination protein nusG {ECO:0000313|EMBL:KKQ09069.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
DNA topoisomerase IV subunit A
ACD30_11_17
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

11681..12190
DNA (510bp) protein (170aa)
NusG antitermination factor
NUSG (db=PatternScan db_id=PS01014 from=152 to=161 evalue=0.0 interpro_id=IPR015869 interpro_description=Transcription antitermination protein, NusG, bacteria, conserved site)
nusG: transcription termination/antiterminat (db=HMMTigr db_id=TIGR00922 from=2 to=169 evalue=2.0e-69 interpro_id=IPR001062 interpro_description=Transcription antitermination protein, NusG GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=HMMSmart db_id=SM00738 from=1 to=104 evalue=2.4e-34 interpro_id=IPR006645 interpro_description=Transcription antitermination protein, NusG, N-terminal GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: positive regulation of RNA elongation from RNA polymerase II promoter (GO:0032968))
ACD30_11_18
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


12200..12631
DNA (432bp) protein (144aa)
rplK; 50S ribosomal protein L11
seg (db=Seg db_id=seg from=13 to=31)
L11_bact: ribosomal protein L11 (db=HMMTigr db_id=TIGR01632 from=4 to=142 evalue=2.6e-64 interpro_id=IPR006519 interpro_description=Ribosomal protein L11, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
no description (db=HMMSmart db_id=SM00649 from=10 to=141 evalue=3.4e-64 interpro_id=IPR000911 interpro_description=Ribosomal protein L11 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD30_11_19
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

12678..13751
DNA (1074bp) protein (358aa)
seg (db=Seg db_id=seg from=282 to=298)
seg (db=Seg db_id=seg from=12 to=25)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
EF_HAND_1 (db=PatternScan db_id=PS00018 from=65 to=77 evalue=0.0 interpro_id=IPR018247 interpro_description=EF-Hand 1, calcium-binding site)
ACD30_11_20
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(13759..13875)
DNA (117bp) protein (39aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
Uncharacterized protein {ECO:0000313|EMBL:KKQ09065.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_11_21
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(13872..14081)
DNA (210bp) protein (70aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=40 to=62)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
transmembrane_regions 13..35 Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_16_curated
ACD30_11_22
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


14186..15193
DNA (1008bp) protein (336aa)
rplA; 50S ribosomal protein L1
seg (db=Seg db_id=seg from=111 to=121)
seg (db=Seg db_id=seg from=83 to=100)
seg (db=Seg db_id=seg from=131 to=146)
ACD30_11_23
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(15221..15583)
DNA (363bp) protein (121aa)
S23 ribosomal protein n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J642_9FLAO (db=UNIREF evalue=3.0e-23 bit_score=110.0 identity=48.7 coverage=94.2148760330578)
S23 ribosomal protein
Ribosomal_S23p (db=HMMPfam db_id=PF05635 from=6 to=115 evalue=3.7e-38 interpro_id=IPR008815 interpro_description=23S rRNA-associated protein)
S23 ribosomal protein {ECO:0000313|EMBL:KKQ09062.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_5.;"
ACD30_11_24
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(15616..17247)
DNA (1632bp) protein (544aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=229 to=250)
transmembrane_regions (db=TMHMM db_id=tmhmm from=278 to=300)
transmembrane_regions (db=TMHMM db_id=tmhmm from=312 to=329)
transmembrane_regions (db=TMHMM db_id=tmhmm from=333 to=355)
ACD30_11_25

Not on your lists

comp(17367..17654)
DNA (288bp) protein (96aa)
XRE family transcriptional regulator
HTH_3 (db=HMMPfam db_id=PF01381 from=40 to=90 evalue=3.7e-13 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=25 to=95 evalue=1.7e-11 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=HMMSmart db_id=SM00530 from=38 to=93 evalue=2.2e-10 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
ACD30_11_26
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(17712..18035)
DNA (324bp) protein (108aa)
hypothetical protein
Gp49 (db=HMMPfam db_id=PF05973 from=19 to=107 evalue=8.2e-21 interpro_id=IPR009241 interpro_description=Protein of unknown function DUF891)
protein of unknown function DUF891 alias=ACD30_32008.27180.10G0026,ACD30_32008.27180.10_26,ACD30_C00011G00026 id=35884 tax=ACD30 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OP11 organism_desc=OP11
Toxin-antitoxin system, toxin component, RelE family {ECO:0000313|EMBL:KKQ09059.1}; TaxID=1618426 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_36_
ACD30_11_27
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(18028..19038)
DNA (1011bp) protein (337aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=120 to=142)
transmembrane_regions (db=TMHMM db_id=tmhmm from=147 to=169)
transmembrane_regions (db=TMHMM db_id=tmhmm from=216 to=238)
transmembrane_regions (db=TMHMM db_id=tmhmm from=259 to=281)
ACD30_11_28
GWB1_OP11_36_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

19165..20127
DNA (963bp) protein (321aa)
seg (db=Seg db_id=seg from=14 to=26)
seg (db=Seg db_id=seg from=196 to=209)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
Type I dockerin domain (db=superfamily db_id=SSF63446 from=189 to=260 evalue=1.4e-08 interpro_id=IPR016134 interpro_description=Cellulosome enzyme, dockerin type I GO=Biological Process: polysaccharide catabolic process (GO:0000272))
ACD30_11_29
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

20180..20731
DNA (552bp) protein (184aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=27 to=39)
seg 27..39 Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_16_curated
ACD30_11_30
RHI_OP11_Daviesbacteria_37_16, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

20786..21199
DNA (414bp) protein (138aa)
seg (db=Seg db_id=seg from=12 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
Cupredoxins (db=superfamily db_id=SSF49503 from=30 to=137 evalue=3.0e-12 interpro_id=IPR008972 interpro_description=Cupredoxin)
no description (db=Gene3D db_id=G3DSA:2.60.40.420 from=30 to=137 evalue=5.3e-06 interpro_id=IPR008972 interpro_description=Cupredoxin)
Displaying items 1-30 of 36 in total

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